y
Basic Information | |
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Species | Manihot esculenta |
Cazyme ID | cassava4.1_022956m |
Family | CE8 |
Protein Properties | Length: 340 Molecular Weight: 38540 Isoelectric Point: 8.1365 |
Chromosome | Chromosome/Scaffold: 07571 Start: 682334 End: 683742 |
Description | Pectin lyase-like superfamily protein |
View CDS |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CE8 | 40 | 327 | 0 |
IFVDKSGHGNFTKIQSAIDSVPENNTQWIRIRISAGKYKEKVVIPLKKPCIFLEGSGSHHTSVEFDDHQDLPTSAIFISYSDNIVAKGITFKNTYNLQIR EDKIIWIRAPAVRIRGDKTAFYHCAFFGIQDTFFDDKGRHYFKKCYIEGAMDFIYGAAQSIYDECVISLNVEKYRPGKPGCITAQKKEWAEEHSGFVFKN CKITGIGKACLGRAWGPYSTVIIYNSTITDVVVPQGWSAWDFVGHEANFTYVETNNRGRGADTANRVPWLQKLDDFQLSKFVTMSFID |
Full Sequence |
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Protein Sequence Length: 340 Download |
MQNLRTVLFI WMLLSVTMSV CKALDCQLNE SNQYKVAYTI FVDKSGHGNF TKIQSAIDSV 60 PENNTQWIRI RISAGKYKEK VVIPLKKPCI FLEGSGSHHT SVEFDDHQDL PTSAIFISYS 120 DNIVAKGITF KNTYNLQIRE DKIIWIRAPA VRIRGDKTAF YHCAFFGIQD TFFDDKGRHY 180 FKKCYIEGAM DFIYGAAQSI YDECVISLNV EKYRPGKPGC ITAQKKEWAE EHSGFVFKNC 240 KITGIGKACL GRAWGPYSTV IIYNSTITDV VVPQGWSAWD FVGHEANFTY VETNNRGRGA 300 DTANRVPWLQ KLDDFQLSKF VTMSFIDEDG WIAKLPTVS* 360 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02432 | PLN02432 | 1.0e-80 | 37 | 332 | 297 | + putative pectinesterase | ||
PLN02480 | PLN02480 | 4.0e-82 | 39 | 332 | 295 | + Probable pectinesterase | ||
PLN02682 | PLN02682 | 5.0e-84 | 32 | 332 | 312 | + pectinesterase family protein | ||
PLN02176 | PLN02176 | 5.0e-111 | 30 | 336 | 308 | + putative pectinesterase | ||
PLN02497 | PLN02497 | 3.0e-127 | 27 | 336 | 311 | + probable pectinesterase |
Gene Ontology | |
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GO Term | Description |
GO:0005618 | cell wall |
GO:0030599 | pectinesterase activity |
GO:0042545 | cell wall modification |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
RefSeq | XP_002318946.1 | 0 | 4 | 336 | 5 | 338 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002330032.1 | 0 | 1 | 336 | 1 | 323 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002515255.1 | 0 | 1 | 336 | 1 | 335 | Pectinesterase-2 precursor, putative [Ricinus communis] |
RefSeq | XP_002515259.1 | 0 | 19 | 339 | 345 | 663 | pectinesterase, putative [Ricinus communis] |
RefSeq | XP_002515259.1 | 0 | 23 | 338 | 24 | 341 | pectinesterase, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1gq8_A | 5e-36 | 36 | 332 | 5 | 308 | A Chain A, Pectin Methylesterase From Carrot |
PDB | 1xg2_A | 7e-23 | 42 | 308 | 7 | 277 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 3uw0_A | 0.0000000002 | 38 | 259 | 31 | 274 | A Chain A, Pectin Methylesterase From Yersinia Enterocolitica |
PDB | 2ntq_B | 0.0000000003 | 36 | 259 | 2 | 250 | A Chain A, Pectin Methylesterase From Yersinia Enterocolitica |
PDB | 2ntq_A | 0.0000000003 | 36 | 259 | 2 | 250 | A Chain A, Pectin Methylesterase From Yersinia Enterocolitica |
Metabolic Pathways | |||
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Pathway Name | Reaction | EC | Protein Name |
homogalacturonan degradation | RXN-2102 | EC-3.1.1.11 | pectinesterase |