| Basic Information | |
|---|---|
| Species | Manihot esculenta |
| Cazyme ID | cassava4.1_022973m |
| Family | AA3 |
| Protein Properties | Length: 1168 Molecular Weight: 130935 Isoelectric Point: 8.732 |
| Chromosome | Chromosome/Scaffold: 02892 Start: 87855 End: 93144 |
| Description | Long-chain fatty alcohol dehydrogenase family protein |
| View CDS | |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| AA3 | 21 | 739 | 0 |
| YDAIVVGSGYGGSIAACRMSLAGTKVCLIEKGRRWKAEDFPDDSLKLMSAVRMENQNLGISFGPKHALFQVYEQNDSLAAVACGLGGGSLVNAGVMLKTP VRARRNPKWPKEWERDWDICEASAASVLRLQSSPVKFPIAKVMGEITERETEEICDSLFKLSMNFQVEEPPSTTMKLQQTSSCLACGNCIAGCPHDAKNS TDKNYILSAVQAGCTVRTECQVQYLTENMHEVLEEGRIIRKRRWRVYLNEIDYITSDFVILSAGVFGTTEILFQSQMRGLKLSKALGSGFSCNGNTVAYV AGSTAPLCGYGLDRKQVSTIPFQERPGPSISSSYTSSLGFTIQSAVLPRAYPYLLFKGIVNYGWPTGYWFIHGIIDKLKHILGLKSTQAIALNAMGYDES DGNIVLDKDTEKICFTPPYDPLLPQKIEAYQKLTKKLGGILFMSRYRSTAVHLLGGCNASSDPSRGVCNHKGQIFEPTTPASVHPGLYVCDASLIPCSVG INPCLTIATAAEHVSRHLVQDVLDYKSKRGRNFDISTVERNPCLVADKNSDNDHNSNVLFKETMRGYVGGMPCSAHLKMKMNYQNKEGIDEHNLLSRGFH PLLRGKVGGFVVFKAIEKDKIHIIDGEVDLCVVDRRTPYTQYMHYRLLLVASSGSKYVLEGKKILNPYLFAVYAWKETTTLHVTFEKVAANYARETMVNL KGELRVSFMELIKSLWSLK | |||
| Full Sequence |
|---|
| Protein Sequence Length: 1168 Download |
| KKDWKQEHLG ARMGDKEDCG YDAIVVGSGY GGSIAACRMS LAGTKVCLIE KGRRWKAEDF 60 PDDSLKLMSA VRMENQNLGI SFGPKHALFQ VYEQNDSLAA VACGLGGGSL VNAGVMLKTP 120 VRARRNPKWP KEWERDWDIC EASAASVLRL QSSPVKFPIA KVMGEITERE TEEICDSLFK 180 LSMNFQVEEP PSTTMKLQQT SSCLACGNCI AGCPHDAKNS TDKNYILSAV QAGCTVRTEC 240 QVQYLTENMH EVLEEGRIIR KRRWRVYLNE IDYITSDFVI LSAGVFGTTE ILFQSQMRGL 300 KLSKALGSGF SCNGNTVAYV AGSTAPLCGY GLDRKQVSTI PFQERPGPSI SSSYTSSLGF 360 TIQSAVLPRA YPYLLFKGIV NYGWPTGYWF IHGIIDKLKH ILGLKSTQAI ALNAMGYDES 420 DGNIVLDKDT EKICFTPPYD PLLPQKIEAY QKLTKKLGGI LFMSRYRSTA VHLLGGCNAS 480 SDPSRGVCNH KGQIFEPTTP ASVHPGLYVC DASLIPCSVG INPCLTIATA AEHVSRHLVQ 540 DVLDYKSKRG RNFDISTVER NPCLVADKNS DNDHNSNVLF KETMRGYVGG MPCSAHLKMK 600 MNYQNKEGID EHNLLSRGFH PLLRGKVGGF VVFKAIEKDK IHIIDGEVDL CVVDRRTPYT 660 QYMHYRLLLV ASSGSKYVLE GKKILNPYLF AVYAWKETTT LHVTFEKVAA NYARETMVNL 720 KGELRVSFME LIKSLWSLKG DRSGRFICIL LQSLLRTYVL QTPRESHRDF IPNDYSNKPY 780 PRSTLYKIKT EDGYFISCRQ WKCFPNPMRL KGQKQLNPVL LLDGHSTESY WLPTEPHDLI 840 RTLLEEGHEV WVLRPRLHPA NPANSFTIED IGKYDIPAAI NLILELNGPS TKIHVVAHCV 900 GGLAIHIALM GGHVSATHIA SLSCTNSSMF FKLTTLARFK MWLPIIPVSM AILGKKKILP 960 LLETSKRSFR HRLLKFIASC IPRYEKCTCK ECETFSGIFG NTFWHKNVSP TLHQWLNEYC 1020 LTRLPMGAFP HLRKICNSGF IVDKNGNDSY LIHPERMAVS TLYISGGWSL LVTPETSFLA 1080 NKYMKLHQPS FRHEREVVEG FGHSDLLIGE KSYEMVFPHI LSHVRVAEQE SKGVMSSERK 1140 KYSNDALNWS GDLYEGCKGF GKYFSVY* 1200 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PRK06370 | PRK06370 | 0.0001 | 21 | 53 | 33 | + mercuric reductase; Validated | ||
| COG3243 | PhaC | 6.0e-5 | 830 | 953 | 129 | + Poly(3-hydroxyalkanoate) synthetase [Lipid metabolism] | ||
| pfam00732 | GMC_oxred_N | 8.0e-8 | 104 | 295 | 205 | + GMC oxidoreductase. This family of proteins bind FAD as a cofactor. | ||
| pfam05199 | GMC_oxred_C | 3.0e-10 | 462 | 533 | 72 | + GMC oxidoreductase. This domain found associated with pfam00732. | ||
| COG2303 | BetA | 5.0e-27 | 21 | 541 | 589 | + Choline dehydrogenase and related flavoproteins [Amino acid transport and metabolism] | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0009055 | electron carrier activity |
| GO:0016614 | oxidoreductase activity, acting on CH-OH group of donors |
| GO:0050660 | flavin adenine dinucleotide binding |
| GO:0051536 | iron-sulfur cluster binding |
| GO:0055114 | oxidation-reduction process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CAN62038.1 | 0 | 13 | 1156 | 12 | 1092 | hypothetical protein [Vitis vinifera] |
| EMBL | CBI30326.1 | 0 | 348 | 1156 | 520 | 1328 | unnamed protein product [Vitis vinifera] |
| EMBL | CBI30326.1 | 0 | 650 | 1165 | 1 | 519 | unnamed protein product [Vitis vinifera] |
| RefSeq | XP_002530344.1 | 0 | 6 | 1161 | 4 | 1148 | conserved hypothetical protein [Ricinus communis] |
| RefSeq | XP_002530345.1 | 0 | 5 | 1156 | 3 | 1063 | hypothetical protein RCOM_0293450 [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3cox_A | 0.00000002 | 23 | 315 | 14 | 323 | A Chain A, Crystal Structure Of Human Enolase 1 |
| PDB | 3cox_A | 0.003 | 504 | 533 | 467 | 496 | A Chain A, Crystal Structure Of Human Enolase 1 |
| PDB | 1coy_A | 0.00000002 | 23 | 315 | 14 | 323 | A Chain A, Crystal Structure Of Cholesterol Oxidase Complexed With A Steroid Substrate. Implications For Fad Dependent Alcohol Oxidases |
| PDB | 1coy_A | 0.003 | 504 | 533 | 467 | 496 | A Chain A, Crystal Structure Of Cholesterol Oxidase Complexed With A Steroid Substrate. Implications For Fad Dependent Alcohol Oxidases |
| PDB | 1b8s_A | 0.000003 | 202 | 542 | 206 | 501 | A Chain A, Cholesterol Oxidase From Streptomyces Glu361gln Mutant |
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
| Hit | Length | Start | End | EValue |
| DV113989 | 240 | 826 | 1065 | 0 |
| DV112370 | 237 | 828 | 1064 | 0 |
| CF418642 | 220 | 872 | 1091 | 0 |
| DV145772 | 243 | 596 | 838 | 0 |
| DT750882 | 256 | 649 | 904 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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| Phylogeny |
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