| Basic Information | |
|---|---|
| Species | Manihot esculenta |
| Cazyme ID | cassava4.1_023066m |
| Family | GH35 |
| Protein Properties | Length: 724 Molecular Weight: 80124.1 Isoelectric Point: 8.2656 |
| Chromosome | Chromosome/Scaffold: 07595 Start: 373467 End: 377834 |
| Description | beta-galactosidase 16 |
| View CDS | |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GH35 | 1 | 213 | 0 |
| GLPFWLYNISGIVYRSDNEPFKFQMQSFTTKIVTMMQSEKLYASQGGPIILSQIENEYATVEKAYGEKGAAYVKWAAEMAVALNTGVPWVMCKQNDAPDP VINTCNGLKCGETFVGPNSPNKPAIWTENWTTRYVINGMNIRTRAVEDIAFQVALFIIAKNGSFVNYYMYHGGTNFGRTASAFIPPSYYDLAPLDEYGLI RQPKWGHLKDLHA | |||
| Full Sequence |
|---|
| Protein Sequence Length: 724 Download |
| GLPFWLYNIS GIVYRSDNEP FKFQMQSFTT KIVTMMQSEK LYASQGGPII LSQIENEYAT 60 VEKAYGEKGA AYVKWAAEMA VALNTGVPWV MCKQNDAPDP VINTCNGLKC GETFVGPNSP 120 NKPAIWTENW TTRYVINGMN IRTRAVEDIA FQVALFIIAK NGSFVNYYMY HGGTNFGRTA 180 SAFIPPSYYD LAPLDEYGLI RQPKWGHLKD LHAVIKLCLN PLLSGAQMNI SLGQQQQAYV 240 FNGQAGECAA FLVNHDTENK ASVLFKNASY DLPPKSISIL PDCKNVAFNT AKVSTQYTTR 300 SMVRNRLLDG AQTWGEFHEA VINFEDTSIK SENLLEQMNT TQDASDYLWY TFRFQQESSD 360 AEAVLNVRSL GHVLHAFVNG QAVGYAQGSY KNPQFNLQST VSLIAGINNV SLLSVMVGLP 420 DSGAYMERKA AGLRRVMIED NQGNKTFTNY SWGYQVGLLG EKLQLYTEQG SSQIQWGNFS 480 SPQNPLTWYK TVFNAPAGDA PVALNLGSMG KGEAWVNGNS IGRYWPSYRS PDGSSQIWYN 540 HCTHNGCIIS RSLHVWLVEL LILLCFDFRY NVPRSFLKPT RNLLVLLEEV GGNPLQISVD 600 TASISQVCSY VTASHLPPVS SWVVYEQKTK TYMKIKQRKA VVKLGCPSNS KISNIAFASY 660 GTPLGNCTAA YAVGNCHSYS SKAIVEKACL GKMRCSIPVT NRYFGGDPCS ANEKSLLVVA 720 ECR* 780 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam02140 | Gal_Lectin | 4.0e-18 | 644 | 722 | 82 | + Galactose binding lectin domain. | ||
| pfam01301 | Glyco_hydro_35 | 1.0e-77 | 1 | 215 | 229 | + Glycosyl hydrolases family 35. | ||
| PLN03059 | PLN03059 | 0 | 1 | 722 | 735 | + beta-galactosidase; Provisional | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005529 | Interacting selectively and non-covalently with any carbohydrate, which includes monosaccharides, oligosaccharides and polysaccharides as well as substances derived from monosaccharides by reduction of the carbonyl group (alditols), by oxidation of one or more hydroxy groups to afford the corresponding aldehydes, ketones, or carboxylic acids, or by replacement of one or more hydroxy group(s) by a hydrogen atom. Cyclitols are generally not regarded as carbohydrates." [CHEBI:16646, GOC:mah] |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CBI18990.1 | 0 | 1 | 722 | 128 | 816 | unnamed protein product [Vitis vinifera] |
| RefSeq | XP_002284529.1 | 0 | 1 | 723 | 124 | 813 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002302225.1 | 0 | 1 | 722 | 108 | 797 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002327281.1 | 0 | 1 | 723 | 126 | 788 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002521778.1 | 0 | 1 | 723 | 124 | 828 | beta-galactosidase, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3d3a_A | 0.00000000003 | 1 | 211 | 108 | 325 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
| PDB | 3thd_D | 0.00006 | 1 | 198 | 111 | 318 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
| PDB | 3thd_C | 0.00006 | 1 | 198 | 111 | 318 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| lactose degradation III | BETAGALACTOSID-RXN | EC-3.2.1.23 | β-galactosidase |
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
| Hit | Length | Start | End | EValue |
| HO778160 | 618 | 1 | 604 | 0 |
| HO780602 | 540 | 1 | 528 | 0 |
| HO795552 | 520 | 1 | 508 | 0 |
| CO074493 | 292 | 1 | 292 | 0 |
| DR520920 | 305 | 5 | 308 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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| Phylogeny |
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