| Basic Information | |
|---|---|
| Species | Manihot esculenta |
| Cazyme ID | cassava4.1_023088m |
| Family | GH35 |
| Protein Properties | Length: 605 Molecular Weight: 66543.3 Isoelectric Point: 5.4647 |
| Chromosome | Chromosome/Scaffold: 07595 Start: 366635 End: 370016 |
| Description | beta-galactosidase 16 |
| View CDS | |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
 | |||
| Family | Start | End | Evalue |
| GH35 | 1 | 240 | 0 |
| FDFSGRGDIVSFIKEVQAQGLYVCLRIGPFIESEWSYGGLPIWLQNITGIVYRSDNEPFKTHMESFVKKIVTMMQSEKLYASQGGPIILSQIENEYGMVE KAFDEKGPSYVKWAAEMAVALNTGVPWVMCKQDDAPDPVINACNGLRCGETFVSPNSPHKPAIWTENWTTRAVEDIAFQVALFIIAKKGSFVNYYMYHAG TNFGRTASAFVPASYYDLAPLDEYGFARQPTWGHLKDLHA | |||
| Full Sequence |
|---|
| Protein Sequence Length: 605 Download |
| FDFSGRGDIV SFIKEVQAQG LYVCLRIGPF IESEWSYGGL PIWLQNITGI VYRSDNEPFK 60 THMESFVKKI VTMMQSEKLY ASQGGPIILS QIENEYGMVE KAFDEKGPSY VKWAAEMAVA 120 LNTGVPWVMC KQDDAPDPVI NACNGLRCGE TFVSPNSPHK PAIWTENWTT RAVEDIAFQV 180 ALFIIAKKGS FVNYYMYHAG TNFGRTASAF VPASYYDLAP LDEYGFARQP TWGHLKDLHA 240 AIRQCSDTLL SGEQKSIPLG KLQQAYVFNG KAGECAAFLV NNDAHNEASV QFQGAAYDLP 300 PESISILPDC KNVSSGCTTR NMFKVRLLDA AQMWGEFHEA IVNYDDTSRR LGILLEQMHA 360 TEDASDYLWY TFRFQQEASD AGAVLNVKSL GHVLRAFVNG QASGCVQGSK KNPEFNLQSN 420 VSLNAGVNNV PLLSVMVGLP DSGAHLERAA AGIRTVTIQD SKGIKDFTNY SWGYQNNSTQ 480 IQLGQFSKGQ IPLTWYKALF DAPPGDAPVA VNLGSMGKGE AWVNGNSLGR YWPSYRSPNG 540 SSQIWYNVPR SFLKPTGNLL VLLEEVGGDP LQISVDTAAI SQVCSPQECH LPIISTTILH 600 YDFI* |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| COG1874 | LacA | 2.0e-5 | 1 | 116 | 122 | + Beta-galactosidase [Carbohydrate transport and metabolism] | ||
| pfam01301 | Glyco_hydro_35 | 7.0e-99 | 1 | 242 | 267 | + Glycosyl hydrolases family 35. | ||
| PLN03059 | PLN03059 | 0 | 3 | 585 | 646 | + beta-galactosidase; Provisional | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CBI18990.1 | 0 | 1 | 600 | 90 | 724 | unnamed protein product [Vitis vinifera] |
| RefSeq | XP_002302225.1 | 0 | 1 | 584 | 70 | 684 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002306647.1 | 0 | 1 | 594 | 64 | 684 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002327281.1 | 0 | 1 | 600 | 88 | 690 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002521778.1 | 0 | 1 | 596 | 86 | 728 | beta-galactosidase, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3d3a_A | 5e-19 | 1 | 225 | 70 | 313 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
| PDB | 3thd_D | 0.000000000000002 | 1 | 225 | 73 | 318 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
| PDB | 3thd_C | 0.000000000000002 | 1 | 225 | 73 | 318 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| lactose degradation III | BETAGALACTOSID-RXN | EC-3.2.1.23 | β-galactosidase |
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
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| Hit | Length | Start | End | EValue |
| HO778160 | 648 | 1 | 587 | 0 |
| HO780602 | 576 | 1 | 535 | 0 |
| HO795552 | 528 | 29 | 515 | 0 |
| CO074493 | 287 | 38 | 313 | 0 |
| EL473915 | 274 | 6 | 268 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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