| Basic Information | |
|---|---|
| Species | Manihot esculenta |
| Cazyme ID | cassava4.1_023181m |
| Family | GH35 |
| Protein Properties | Length: 830 Molecular Weight: 93470.2 Isoelectric Point: 8.2841 |
| Chromosome | Chromosome/Scaffold: 01481 Start: 162344 End: 166741 |
| Description | glycosyl hydrolase family 35 protein |
| View CDS | |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
 | |||
| Family | Start | End | Evalue |
| GH35 | 39 | 343 | 0 |
| LIIDGNRELLFSGSIHYPRSTPEMWPELIAKAKRGGLNLIQTYVFWNIHEPVKGQYDFEGRCDVVKFFKMIGEQGMYATLRLGPFIQAEWNHGGLPYWLR EIPNIIFRSYNEPYMIHMEKFIRTIVEKIREAKLFAPQGGPIILAQIENEYNTVQLAYRELGDKYVQWAGNFALGLKVGVPWVMCKQRDAPGEVINSCNG RHCGDTFPGPNRPNKPYIWTENWTAQFRVFGDPPSQRAAEDIAFSVARWFSKNGSLVNYYMFHGGTNLDRTAASFVTTRYYDEAPLDEFGLERQPKYGHL KDLHR | |||
| Full Sequence |
|---|
| Protein Sequence Length: 830 Download |
| MILAARHGFF VMAIFSLLVS SAIADGARSI QVTYDARSLI IDGNRELLFS GSIHYPRSTP 60 EMWPELIAKA KRGGLNLIQT YVFWNIHEPV KGQYDFEGRC DVVKFFKMIG EQGMYATLRL 120 GPFIQAEWNH GGLPYWLREI PNIIFRSYNE PYMIHMEKFI RTIVEKIREA KLFAPQGGPI 180 ILAQIENEYN TVQLAYRELG DKYVQWAGNF ALGLKVGVPW VMCKQRDAPG EVINSCNGRH 240 CGDTFPGPNR PNKPYIWTEN WTAQFRVFGD PPSQRAAEDI AFSVARWFSK NGSLVNYYMF 300 HGGTNLDRTA ASFVTTRYYD EAPLDEFGLE RQPKYGHLKD LHRALRLSKK ALLWGTPGVE 360 TMADDLEARF YEQPGTKLCA AFLVNNDTKQ DQNIKFRGRE FYLPPRSISI LPDCKTVVYN 420 TMTVVAQHNS RNFKKSQTAN KKLKWETISE AIPIQLKVTA KIPNELYFLT KDATDYSWYT 480 TSMVLYPRDL SVRRDILPVI RVASLGHAMV AFINGEYIGS AHGSQIEKSF VLQKPVELKP 540 GVNNITLLGS LVGLPDSGAY MEHRYAGPRG VTILGLNTGT LDLTANGWGH EVGMVGEKGQ 600 WFNEEGSKKV TWKEVPQGEG PPVTWYKAYF DVPEGDDPVA VRMTGMKKGT IWINGKSIGR 660 YWMTYVSPLG IPTQSEYHIP RSYMKPKDNL IVILEEEPAD PGKIEILLVN RDTICSFITE 720 HHPPNVKSWA RKDDTFKTVV DDLRPSAHLR CPDGKKIIAV EFASFGDPYG ACGGYVLGNC 780 TSPLSMLVVE QNCAGKNECN IPMERSLFDK DHDACPDIKK TLAIQVKCG* |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
 | ||||||||
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam02449 | Glyco_hydro_42 | 1.0e-6 | 54 | 189 | 150 | + Beta-galactosidase. This group of beta-galactosidase enzymes belong to the glycosyl hydrolase 42 family. The enzyme catalyzes the hydrolysis of terminal, non-reducing terminal beta-D-galactosidase residues. | ||
| pfam02140 | Gal_Lectin | 2.0e-16 | 749 | 828 | 83 | + Galactose binding lectin domain. | ||
| COG1874 | LacA | 3.0e-20 | 32 | 189 | 168 | + Beta-galactosidase [Carbohydrate transport and metabolism] | ||
| pfam01301 | Glyco_hydro_35 | 2.0e-146 | 38 | 345 | 322 | + Glycosyl hydrolases family 35. | ||
| PLN03059 | PLN03059 | 0 | 9 | 828 | 846 | + beta-galactosidase; Provisional | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005529 | Interacting selectively and non-covalently with any carbohydrate, which includes monosaccharides, oligosaccharides and polysaccharides as well as substances derived from monosaccharides by reduction of the carbonyl group (alditols), by oxidation of one or more hydroxy groups to afford the corresponding aldehydes, ketones, or carboxylic acids, or by replacement of one or more hydroxy group(s) by a hydrogen atom. Cyclitols are generally not regarded as carbohydrates." [CHEBI:16646, GOC:mah] |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAS76480.1 | 0 | 26 | 829 | 43 | 843 | beta-galactosidase [Gossypium hirsutum] |
| GenBank | ACC60982.1 | 0 | 32 | 829 | 28 | 827 | beta-galactosidase 2 precursor [Petunia x hybrida] |
| RefSeq | XP_002278545.1 | 0 | 10 | 829 | 8 | 830 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002306183.1 | 0 | 23 | 828 | 22 | 826 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002312963.1 | 0 | 7 | 828 | 6 | 825 | predicted protein [Populus trichocarpa] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3thd_D | 6e-38 | 28 | 341 | 7 | 330 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
| PDB | 3thd_D | 0.0001 | 587 | 723 | 503 | 630 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
| PDB | 3thd_C | 6e-38 | 28 | 341 | 7 | 330 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
| PDB | 3thd_C | 0.0001 | 587 | 723 | 503 | 630 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
| PDB | 3thd_B | 6e-38 | 28 | 341 | 7 | 330 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| lactose degradation III | BETAGALACTOSID-RXN | EC-3.2.1.23 | β-galactosidase |
