| Basic Information | |
|---|---|
| Species | Manihot esculenta |
| Cazyme ID | cassava4.1_023442m |
| Family | GT30 |
| Protein Properties | Length: 273 Molecular Weight: 31944.4 Isoelectric Point: 10.0794 |
| Chromosome | Chromosome/Scaffold: 04157 Start: 984 End: 1914 |
| Description | |
| View CDS | |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| GT30 | 6 | 167 | 8.2e-37 |
| SLKARFFLFRNISQKRSDVHFHVCSYGEAKSIKELVLKFDSRITTITQTGYDYAKEICNKVNYLAFENWIPFWLKPSKVLVIFEAEYWLMFVFIAKLQKS KVILLNARISDNSYASYKKFRFFYKKIFCYIDEVFAQSEADKIRLEDLGAKNVKIFPNIKSK | |||
| Full Sequence |
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| Protein Sequence Length: 273 Download |
| PKYKNSLKAR FFLFRNISQK RSDVHFHVCS YGEAKSIKEL VLKFDSRITT ITQTGYDYAK 60 EICNKVNYLA FENWIPFWLK PSKVLVIFEA EYWLMFVFIA KLQKSKVILL NARISDNSYA 120 SYKKFRFFYK KIFCYIDEVF AQSEADKIRL EDLGAKNVKI FPNIKSKLQI CPAQKYFKPK 180 QKLIILASTH KGEEELLLKH YKMDKQEKLI IAPRHPERFL EVEQLLHDKD VVVLGGSFFE 240 GIGGHNPIEV AHFNNVLISG VYIHNQKSLF KK* |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam04413 | Glycos_transf_N | 4.0e-32 | 3 | 165 | 183 | + 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase). Members of this family transfer activated sugars to a variety of substrates, including glycogen, fructose-6-phosphate and lipopolysaccharides. Members of the family transfer UDP, ADP, GDP or CMP linked sugars. The Glycos_transf_N region is flanked at the N-terminus by a signal peptide and at the C-terminus by Glycos_transf_1 (pfam00534). The eukaryotic glycogen synthases may be distant members of this bacterial family. | ||
| COG1519 | KdtA | 3.0e-72 | 1 | 272 | 334 | + 3-deoxy-D-manno-octulosonic-acid transferase [Cell envelope biogenesis, outer membrane] | ||
| PRK05749 | PRK05749 | 2.0e-81 | 1 | 272 | 337 | + 3-deoxy-D-manno-octulosonic-acid transferase; Reviewed | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0005529 | Interacting selectively and non-covalently with any carbohydrate, which includes monosaccharides, oligosaccharides and polysaccharides as well as substances derived from monosaccharides by reduction of the carbonyl group (alditols), by oxidation of one or more hydroxy groups to afford the corresponding aldehydes, ketones, or carboxylic acids, or by replacement of one or more hydroxy group(s) by a hydrogen atom. Cyclitols are generally not regarded as carbohydrates." [CHEBI:16646, GOC:mah] |
| GO:0005975 | carbohydrate metabolic process |
| GO:0016740 | transferase activity |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| RefSeq | YP_001482250.1 | 0 | 1 | 272 | 28 | 336 | 3-deoxy-D-manno-octulosonic-acid transferase [Campylobacter jejuni subsp. jejuni 81116] |
| RefSeq | ZP_00366859.1 | 0 | 1 | 272 | 20 | 328 | 3-deoxy-d-manno-octulosonic-acid transferase (kdtA) [Campylobacter coli RM2228] |
| RefSeq | ZP_01069788.1 | 0 | 1 | 272 | 28 | 336 | 3-deoxy-D-manno-octulosonic-acid transferase [Campylobacter jejuni subsp. jejuni 260.94] |
| RefSeq | ZP_01071484.1 | 0 | 1 | 272 | 28 | 336 | 3-deoxy-D-manno-octulosonic-acid transferase [Campylobacter jejuni subsp. jejuni HB93-13] |
| RefSeq | ZP_06371456.1 | 0 | 2 | 272 | 19 | 326 | 3-deoxy-D-manno-octulosonic-acid transferase [Campylobacter jejuni subsp. jejuni 414] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 2xcu_D | 0.00000000004 | 10 | 269 | 29 | 317 | A Chain A, Crystal Structure Of The Polygalacturonase From Colletotrichum Lupini And Its Implications For The Interaction With Polygalacturonase- Inhibiting Proteins |
| PDB | 2xcu_C | 0.00000000004 | 10 | 269 | 29 | 317 | A Chain A, Crystal Structure Of The Polygalacturonase From Colletotrichum Lupini And Its Implications For The Interaction With Polygalacturonase- Inhibiting Proteins |
| PDB | 2xcu_B | 0.00000000004 | 10 | 269 | 29 | 317 | A Chain A, Crystal Structure Of The Polygalacturonase From Colletotrichum Lupini And Its Implications For The Interaction With Polygalacturonase- Inhibiting Proteins |
| PDB | 2xcu_A | 0.00000000004 | 10 | 269 | 29 | 317 | A Chain A, Crystal Structure Of The Polygalacturonase From Colletotrichum Lupini And Its Implications For The Interaction With Polygalacturonase- Inhibiting Proteins |
| PDB | 2xci_D | 0.00000000004 | 10 | 269 | 29 | 317 | A Chain A, Membrane-Embedded Monofunctional Glycosyltransferase Waaa Of Aquifex Aeolicus, Substrate-Free Form |
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
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| Hit | Length | Start | End | EValue |
| BE941875 | 152 | 83 | 219 | 0.00005 |
| HO500889 | 136 | 177 | 269 | 0.005 |
| HO582822 | 52 | 221 | 272 | 0.041 |
| HO582822 | 43 | 188 | 226 | 0.041 |
| EE566308 | 124 | 180 | 263 | 0.074 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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| Phylogeny |
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