| Basic Information | |
|---|---|
| Species | Manihot esculenta |
| Cazyme ID | cassava4.1_023608m |
| Family | GT4 |
| Protein Properties | Length: 484 Molecular Weight: 54671 Isoelectric Point: 9.3625 |
| Chromosome | Chromosome/Scaffold: 09169 Start: 5351 End: 6802 |
| Description | UDP-Glycosyltransferase superfamily protein |
| View CDS | |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GT4 | 303 | 442 | 2.5e-26 |
| VLGVAGRLVKDKGHPLLFEAFSKLKAKYPNVYLIVAGSGPWEQRYKDLGAQVLVLGSMSPSELRAFYNSIDIFVNPTLRPQGLDLTLMEAMMSGKPVMAS RFPSIKGTIIVDDEFGYMFSPNVESLLESLEMVVMQGSKR | |||
| Full Sequence |
|---|
| Protein Sequence Length: 484 Download |
| MAFNNKSKKT HFSSHFNLCI TLFFIVLFTI PALFLLHTPP SSICNTLSTS SHSNPWSGDL 60 RTAEFAWNRL WFTEIHQPPP LKLKIAVFSR KWPTGTTPGG MERHAYTLHT TLARRGHQIH 120 VFTSPLDGKS SSAPSSLSPL IHCHEGEPGK WRYNKAWERF QEENQRQPFD VVHSESVALP 180 HWLARDVPNL AVSWHGIALE SLQSDIYQDL TRKSDEPISP VANRSMQGVV LKVVNEIRFF 240 KNYAHHVAIS DSCGEMLRDV YQIPKKRVHV IVNGVDEDDF REDVRLGHEF RSKIGVPQNA 300 SLVLGVAGRL VKDKGHPLLF EAFSKLKAKY PNVYLIVAGS GPWEQRYKDL GAQVLVLGSM 360 SPSELRAFYN SIDIFVNPTL RPQGLDLTLM EAMMSGKPVM ASRFPSIKGT IIVDDEFGYM 420 FSPNVESLLE SLEMVVMQGS KRMAQRGKAC RKYAVSMFTA WKMALAYERL FLCIKNETFC 480 AYP* 540 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| TIGR00032 | argG | 2.0e-34 | 99 | 470 | 392 | + argininosuccinate synthase. argG in bacteria, ARG1 in Saccharomyces cerevisiae. There is a very unusual clustering in the alignment, with a deep split between one cohort of E. coli, H. influenzae, and Streptomyces, and the other cohort of eukaryotes, archaea, and the rest of the eubacteria [Amino acid biosynthesis, Glutamate family]. | ||
| cd03807 | GT1_WbnK_like | 3.0e-37 | 94 | 471 | 395 | + This family is most closely related to the GT1 family of glycosyltransferases. WbnK in Shigella dysenteriae has been shown to be involved in the type 7 O-antigen biosynthesis. | ||
| cd03811 | GT1_WabH_like | 1.0e-37 | 84 | 460 | 389 | + This family is most closely related to the GT1 family of glycosyltransferases. WabH in Klebsiella pneumoniae has been shown to transfer a GlcNAc residue from UDP-GlcNAc onto the acceptor GalUA residue in the cellular outer core. | ||
| cd03798 | GT1_wlbH_like | 2.0e-42 | 99 | 471 | 397 | + This family is most closely related to the GT1 family of glycosyltransferases. wlbH in Bordetella parapertussis has been shown to be required for the biosynthesis of a trisaccharide that, when attached to the B. pertussis lipopolysaccharide (LPS) core (band B), generates band A LPS. | ||
| cd03801 | GT1_YqgM_like | 3.0e-67 | 84 | 471 | 402 | + This family is most closely related to the GT1 family of glycosyltransferases and named after YqgM in Bacillus licheniformis about which little is known. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. The members of this family are found mainly in certain bacteria and archaea. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0009058 | biosynthetic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| RefSeq | XP_002271072.1 | 0 | 37 | 483 | 37 | 493 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002271108.1 | 0 | 1 | 483 | 1 | 492 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002303479.1 | 0 | 1 | 482 | 1 | 488 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002326600.1 | 0 | 1 | 482 | 1 | 487 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002519899.1 | 0 | 1 | 483 | 2 | 486 | glycosyltransferase, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 2gek_A | 0.00000004 | 97 | 420 | 33 | 330 | A Chain A, Structure Of Ugt78g1 Complexed With Myricetin And Udp |
| PDB | 2gej_A | 0.00000004 | 97 | 420 | 33 | 330 | A Chain A, Crystal Structure Of Phosphatidylinositol Mannosyltransferase (Pima) From Mycobacterium Smegmatis In Complex With Gdp-Man |
| PDB | 3c4v_B | 0.0000003 | 91 | 439 | 14 | 379 | A Chain A, Crystal Structure Of Phosphatidylinositol Mannosyltransferase (Pima) From Mycobacterium Smegmatis In Complex With Gdp-Man |
| PDB | 3c4v_A | 0.0000003 | 91 | 439 | 14 | 379 | A Chain A, Crystal Structure Of Phosphatidylinositol Mannosyltransferase (Pima) From Mycobacterium Smegmatis In Complex With Gdp-Man |
| PDB | 3c4q_B | 0.0000003 | 91 | 439 | 14 | 379 | A Chain A, Structure Of The Retaining Glycosyltransferase Msha : The First Step In Mycothiol Biosynthesis. Organism : Corynebacterium Glutamicum- Complex With Udp |
