| Basic Information | |
|---|---|
| Species | Manihot esculenta |
| Cazyme ID | cassava4.1_023616m |
| Family | CE8 |
| Protein Properties | Length: 594 Molecular Weight: 66575.6 Isoelectric Point: 6.83 |
| Chromosome | Chromosome/Scaffold: 02871 Start: 244269 End: 246130 |
| Description | pectin methylesterase 1 |
| View CDS | |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| CE8 | 289 | 578 | 0 |
| NVTVAWDGSGDFKSISEAMESIPKKSKSRFVIYVKEGLYLGNVTISKDYWNVMIYGDGMNKTIVSASQNAVDGVSTFFSGTCIAAGRGFIAKDIGFQNTA GPQKEQAVALRSSSDQSIFYRCSFDAFQDTLYTHSNRQFYRDCQIRGTIDFIFGNAAVVFQNCSIQPRQPMPRQFNTITAQSKSDPNQNTGMSIQRCRMD PFDNLTAPTYLGRPWRDYATTVIMQSYIGGFLDPAGWAEWEANVSSVFYAEFENFGAGSLTNRRVRWPGVRLNITSEVAQEFTVEAFIHG | |||
| Full Sequence |
|---|
| Protein Sequence Length: 594 Download |
| MDTAGSISFK SYSKVDEHAE ESFRRRTRKR FIIIAVSTFM LLIIIVGALV GTLAPMNNKK 60 SRDKDLSSQT ESIRAVCNVT RYPDSCYSSM SSALRPSSNV SDPRNPDLEI HKLFLLSLKI 120 ALNEIMSLSS LPSRIISSQR YSNETNDPLV LSALHACETL FEDAIYHIKE CISSIAVHQE 180 DKIMLDDIRT WLSTAVTDQE TCIDGLKDTG KQLILTDEVR YAMINSTMFA SNSLAIASKL 240 LTVLDDLHIP IHRKLLRVLD EHSHVDDGFP TWIHVGDRRL LLEEKPKPNV TVAWDGSGDF 300 KSISEAMESI PKKSKSRFVI YVKEGLYLGN VTISKDYWNV MIYGDGMNKT IVSASQNAVD 360 GVSTFFSGTC IAAGRGFIAK DIGFQNTAGP QKEQAVALRS SSDQSIFYRC SFDAFQDTLY 420 THSNRQFYRD CQIRGTIDFI FGNAAVVFQN CSIQPRQPMP RQFNTITAQS KSDPNQNTGM 480 SIQRCRMDPF DNLTAPTYLG RPWRDYATTV IMQSYIGGFL DPAGWAEWEA NVSSVFYAEF 540 ENFGAGSLTN RRVRWPGVRL NITSEVAQEF TVEAFIHGSR WLPQAHVIYD GTL* 600 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02745 | PLN02745 | 2.0e-149 | 7 | 582 | 607 | + Putative pectinesterase/pectinesterase inhibitor | ||
| PLN02301 | PLN02301 | 3.0e-155 | 145 | 589 | 454 | + pectinesterase/pectinesterase inhibitor | ||
| pfam01095 | Pectinesterase | 2.0e-170 | 289 | 579 | 298 | + Pectinesterase. | ||
| PLN02314 | PLN02314 | 0 | 1 | 593 | 606 | + pectinesterase | ||
| PLN02468 | PLN02468 | 0 | 9 | 589 | 593 | + putative pectinesterase/pectinesterase inhibitor | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004857 | enzyme inhibitor activity |
| GO:0005618 | cell wall |
| GO:0030599 | pectinesterase activity |
| GO:0042545 | cell wall modification |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| RefSeq | XP_002265217.1 | 0 | 8 | 593 | 6 | 578 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002304256.1 | 0 | 8 | 593 | 6 | 588 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002326318.1 | 0 | 6 | 593 | 4 | 596 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002516194.1 | 0 | 1 | 593 | 1 | 599 | Pectinesterase-1 precursor, putative [Ricinus communis] |
| RefSeq | XP_002532945.1 | 0 | 8 | 593 | 6 | 589 | Pectinesterase-3 precursor, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1xg2_A | 0 | 289 | 589 | 4 | 311 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
| PDB | 1gq8_A | 0 | 288 | 582 | 7 | 308 | A Chain A, Pectin Methylesterase From Carrot |
| PDB | 2ntq_B | 1e-18 | 300 | 583 | 18 | 339 | A Chain A, Pectin Methylesterase From Carrot |
| PDB | 2ntq_A | 1e-18 | 300 | 583 | 18 | 339 | A Chain A, Pectin Methylesterase From Carrot |
| PDB | 2ntp_B | 1e-18 | 300 | 583 | 18 | 339 | A Chain A, Pectin Methylesterase From Carrot |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| homogalacturonan degradation | RXN-2102 | EC-3.1.1.11 | pectinesterase |
