| Basic Information | |
|---|---|
| Species | Manihot esculenta |
| Cazyme ID | cassava4.1_023733m |
| Family | CE8 |
| Protein Properties | Length: 640 Molecular Weight: 71425.1 Isoelectric Point: 5.2202 |
| Chromosome | Chromosome/Scaffold: 00080 Start: 46962 End: 53938 |
| Description | Pectin lyase-like superfamily protein |
| View CDS | |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| CE8 | 29 | 316 | 0 |
| IFVDKSGKGNFTAIQKAIDSIPQNNTEWIRIQISADKYSEKVVIPANKPFIFLEGAGRNNTSIEYGDDQDLPTSATFISYADNIKAEGITIKNTYNLQNG GQNITMKRATAIRIQGDKSAFYDCAFVGIQDTFFDDKGSHYFKNCYIEGAIDFIYGSAQSIYEECVISLNVGKYDPGLPSSITAQKKAEPEDPSGFVFKN CEITGTGKAHLGRAWGPYSTVIIYNSTISDIILPQGWNAWHFVGHEENFTYVEANNTGAGADTSRRVPWLKKFDASELSKFVDLSYID | |||
| CE8 | 346 | 625 | 0 |
| ITVDQSGNGNFTTIQSAIDSIPDVNTRWIRIRISPETYREKVTIPVKKPCIFLQGEGSELTRIEWGDHGVTGTSATFTSYPENIVAKGITFKNTYNNPHG QAVSARIRGDKSAFYDCTFLGVQDTFWDEKGRHYFHKCYIEGAVDFIFGKGKSIYEKCIIFVNMGRYEPESPGYITAQKKEWAEHESGFVFKNCEINGTG KAYLGRAWGPYSTVVIHNSTFSDVVVPQGWDAWEYVNQEGNFTYVEVDNKGLGADTSNRVPWVKKLDATELSKFLSLSYV | |||
| Full Sequence |
|---|
| Protein Sequence Length: 640 Download |
| MQRLSSSLLA CMLLLLASVC KANEVANTIF VDKSGKGNFT AIQKAIDSIP QNNTEWIRIQ 60 ISADKYSEKV VIPANKPFIF LEGAGRNNTS IEYGDDQDLP TSATFISYAD NIKAEGITIK 120 NTYNLQNGGQ NITMKRATAI RIQGDKSAFY DCAFVGIQDT FFDDKGSHYF KNCYIEGAID 180 FIYGSAQSIY EECVISLNVG KYDPGLPSSI TAQKKAEPED PSGFVFKNCE ITGTGKAHLG 240 RAWGPYSTVI IYNSTISDII LPQGWNAWHF VGHEENFTYV EANNTGAGAD TSRRVPWLKK 300 FDASELSKFV DLSYIDRDGW IENLWVCKAL DCQLNESSNY KVAYTITVDQ SGNGNFTTIQ 360 SAIDSIPDVN TRWIRIRISP ETYREKVTIP VKKPCIFLQG EGSELTRIEW GDHGVTGTSA 420 TFTSYPENIV AKGITFKNTY NNPHGQAVSA RIRGDKSAFY DCTFLGVQDT FWDEKGRHYF 480 HKCYIEGAVD FIFGKGKSIY EKCIIFVNMG RYEPESPGYI TAQKKEWAEH ESGFVFKNCE 540 INGTGKAYLG RAWGPYSTVV IHNSTFSDVV VPQGWDAWEY VNQEGNFTYV EVDNKGLGAD 600 TSNRVPWVKK LDATELSKFL SLSYVDSDGW LAKLPNIEE* 660 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02682 | PLN02682 | 3.0e-89 | 339 | 631 | 309 | + pectinesterase family protein | ||
| PLN02176 | PLN02176 | 3.0e-112 | 336 | 635 | 307 | + putative pectinesterase | ||
| PLN02176 | PLN02176 | 2.0e-112 | 22 | 324 | 304 | + putative pectinesterase | ||
| PLN02497 | PLN02497 | 1.0e-125 | 26 | 324 | 299 | + probable pectinesterase | ||
| PLN02497 | PLN02497 | 2.0e-128 | 343 | 635 | 300 | + probable pectinesterase | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0005618 | cell wall |
| GO:0030599 | pectinesterase activity |
| GO:0042545 | cell wall modification |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| RefSeq | XP_002277604.1 | 0 | 8 | 635 | 17 | 658 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002515255.1 | 0 | 1 | 324 | 1 | 334 | Pectinesterase-2 precursor, putative [Ricinus communis] |
| RefSeq | XP_002515255.1 | 0 | 327 | 635 | 23 | 335 | Pectinesterase-2 precursor, putative [Ricinus communis] |
| RefSeq | XP_002515259.1 | 0 | 20 | 636 | 27 | 661 | pectinesterase, putative [Ricinus communis] |
| RefSeq | XP_002515259.1 | 0 | 329 | 638 | 24 | 342 | pectinesterase, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1gq8_A | 9.99995e-41 | 342 | 631 | 5 | 308 | A Chain A, Pectin Methylesterase From Carrot |
| PDB | 1gq8_A | 1e-36 | 21 | 322 | 1 | 309 | A Chain A, Pectin Methylesterase From Carrot |
| PDB | 1xg2_A | 1e-29 | 348 | 607 | 7 | 277 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
| PDB | 1xg2_A | 2e-26 | 25 | 297 | 2 | 277 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
| PDB | 1qjv_B | 0.000000000000001 | 356 | 586 | 18 | 290 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| homogalacturonan degradation | RXN-2102 | EC-3.1.1.11 | pectinesterase |
