| Basic Information | |
|---|---|
| Species | Manihot esculenta |
| Cazyme ID | cassava4.1_023781m |
| Family | CBM43 |
| Protein Properties | Length: 465 Molecular Weight: 51624 Isoelectric Point: 8.2346 |
| Chromosome | Chromosome/Scaffold: 06158 Start: 457339 End: 458889 |
| Description | O-Glycosyl hydrolases family 17 protein |
| View CDS | |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| CBM43 | 375 | 458 | 9.4e-28 |
| WCVVAEGANSTALADAMSYACSQGNKTCEQIQLGNQCYKPESLIWHASYAFSSYWAQFKKAGGSCYFNGLATQTAKDPSFGHCK | |||
| GH17 | 26 | 347 | 0 |
| VGINWGSLGNDLPPPPQSVELVKSLGAKGVKIYDADPDILNALKNTDIVVSIMVPNEIIPNISKSQYLSDKWVQANVVPFYPEVKIRYLLVGNEILTNPD NGTWYNLVPAMRRIKSSLKTHNIHKVKVGTPSAMNVLESSFPPSNGTFRSDISAPIINPLLRFLNRTKSFFFVDIYPYFPWAENPKDISLDYALFRSKNI TYSDPVTNLTYTNLFDQMIDSLVFAMKRLGYPDIRIFIAETGWPNNGDLDQIGANIHNAAIYNRNVVKKLTTKPAIGTPARPGSTIPSFIFALYNENQKP GPGTERHFGLLHPNGSKVFEID | |||
| Full Sequence |
|---|
| Protein Sequence Length: 465 Download |
| MEMSYLPLFI FALFVFTCSA DISNKVGINW GSLGNDLPPP PQSVELVKSL GAKGVKIYDA 60 DPDILNALKN TDIVVSIMVP NEIIPNISKS QYLSDKWVQA NVVPFYPEVK IRYLLVGNEI 120 LTNPDNGTWY NLVPAMRRIK SSLKTHNIHK VKVGTPSAMN VLESSFPPSN GTFRSDISAP 180 IINPLLRFLN RTKSFFFVDI YPYFPWAENP KDISLDYALF RSKNITYSDP VTNLTYTNLF 240 DQMIDSLVFA MKRLGYPDIR IFIAETGWPN NGDLDQIGAN IHNAAIYNRN VVKKLTTKPA 300 IGTPARPGST IPSFIFALYN ENQKPGPGTE RHFGLLHPNG SKVFEIDLSG ETPESEYKQP 360 LPAPMNNEPY KGKAWCVVAE GANSTALADA MSYACSQGNK TCEQIQLGNQ CYKPESLIWH 420 ASYAFSSYWA QFKKAGGSCY FNGLATQTAK DPSFGHCKFP SVIF* 480 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam07983 | X8 | 4.0e-18 | 375 | 446 | 77 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
| smart00768 | X8 | 1.0e-33 | 375 | 459 | 85 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. | ||
| pfam00332 | Glyco_hydro_17 | 6.0e-108 | 26 | 347 | 323 | + Glycosyl hydrolases family 17. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| DDBJ | BAA89481.1 | 0 | 4 | 464 | 14 | 478 | beta-1,3-glucanase [Salix gilgiana] |
| EMBL | CBI39470.1 | 0 | 8 | 464 | 11 | 467 | unnamed protein product [Vitis vinifera] |
| RefSeq | XP_002303070.1 | 0 | 14 | 464 | 10 | 461 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002334812.1 | 0 | 1 | 464 | 2 | 465 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002534357.1 | 0 | 78 | 464 | 1 | 387 | Glucan endo-1,3-beta-glucosidase precursor, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 2cyg_A | 0 | 26 | 348 | 1 | 312 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
| PDB | 1ghs_B | 0 | 26 | 348 | 1 | 306 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |
| PDB | 1ghs_A | 0 | 26 | 348 | 1 | 306 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |
| PDB | 3f55_D | 0 | 25 | 349 | 1 | 316 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |
| PDB | 3f55_C | 0 | 25 | 349 | 1 | 316 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |
