| Basic Information | |
|---|---|
| Species | Manihot esculenta |
| Cazyme ID | cassava4.1_024093m |
| Family | AA2 |
| Protein Properties | Length: 309 Molecular Weight: 33631 Isoelectric Point: 9.1058 |
| Chromosome | Chromosome/Scaffold: 10878 Start: 423045 End: 424531 |
| Description | root hair specific 19 |
| View CDS | |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| AA2 | 20 | 292 | 0 |
| SIVRNAVQKKFQQTFVTIPGTLRLFFHDCFVQGCDASVIIQSTPNNKAEKDHPDNLSLAGDGFDTVIKAKAAVDAIPSCRNKVSCADILAMATRDVVALS GGPSYAVELGRLDGLRSSAANVNGNLPKESFNLNQLNSLFASRGLSQADMIALSAAHTLGFSHCNKFSNRIYNFSRQNPVDPTLNKAYAADLQQMCPRNV DPRIAINMDPITPNTFDNVYFKNLQNGKGLFTSDQVLFTDPRSRPTVNTWASNSQAFENAFVTAMTKLGRVGV | |||
| Full Sequence |
|---|
| Protein Sequence Length: 309 Download |
| SVSAQLRQNY YANICPNVES IVRNAVQKKF QQTFVTIPGT LRLFFHDCFV QGCDASVIIQ 60 STPNNKAEKD HPDNLSLAGD GFDTVIKAKA AVDAIPSCRN KVSCADILAM ATRDVVALSG 120 GPSYAVELGR LDGLRSSAAN VNGNLPKESF NLNQLNSLFA SRGLSQADMI ALSAAHTLGF 180 SHCNKFSNRI YNFSRQNPVD PTLNKAYAAD LQQMCPRNVD PRIAINMDPI TPNTFDNVYF 240 KNLQNGKGLF TSDQVLFTDP RSRPTVNTWA SNSQAFENAF VTAMTKLGRV GVKTGRNGNI 300 RRDCAVLN* 360 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam00141 | peroxidase | 2.0e-6 | 241 | 272 | 32 | + Peroxidase. | ||
| cd00314 | plant_peroxidase_like | 3.0e-22 | 20 | 289 | 305 | + Heme-dependent peroxidases similar to plant peroxidases. Along with animal peroxidases, these enzymes belong to a group of peroxidases containing a heme prosthetic group (ferriprotoporphyrin IX), which catalyzes a multistep oxidative reaction involving hydrogen peroxide as the electron acceptor. The plant peroxidase-like superfamily is found in all three kingdoms of life and carries out a variety of biosynthetic and degradative functions. Several sub-families can be identified. Class I includes intracellular peroxidases present in fungi, plants, archaea and bacteria, called catalase-peroxidases, that can exhibit both catalase and broad-spectrum peroxidase activities depending on the steady-state concentration of hydrogen peroxide. Catalase-peroxidases are typically comprised of two homologous domains that probably arose via a single gene duplication event. Class II includes ligninase and other extracellular fungal peroxidases, while class III is comprised of classic extracellular plant peroxidases, like horseradish peroxidase. | ||
| pfam00141 | peroxidase | 6.0e-57 | 22 | 177 | 156 | + Peroxidase. | ||
| PLN03030 | PLN03030 | 1.0e-73 | 7 | 308 | 307 | + cationic peroxidase; Provisional | ||
| cd00693 | secretory_peroxidase | 2.0e-163 | 5 | 306 | 302 | + Horseradish peroxidase and related secretory plant peroxidases. Secretory peroxidases belong to class III of the plant heme-dependent peroxidase superfamily. All members of the superfamily share a heme prosthetic group and catalyze a multistep oxidative reaction involving hydrogen peroxide as the electron acceptor. Class III peroxidases are found in the extracellular space or in the vacuole in plants where they have been implicated in hydrogen peroxide detoxification, auxin catabolism and lignin biosynthesis, and stress response. Class III peroxidases contain four conserved disulphide bridges and two conserved calcium binding sites. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004601 | peroxidase activity |
| GO:0006979 | response to oxidative stress |
| GO:0020037 | heme binding |
| GO:0055114 | oxidation-reduction process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ABB89209.1 | 0 | 1 | 308 | 23 | 330 | peroxidase [Sesamum indicum] |
| GenBank | ACI42310.2 | 0 | 4 | 308 | 25 | 329 | peroxidase 5 [Litchi chinensis] |
| GenBank | ACJ11763.1 | 0 | 1 | 308 | 22 | 329 | class III peroxidase [Gossypium hirsutum] |
| RefSeq | XP_002284278.1 | 0 | 1 | 308 | 24 | 331 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002525252.1 | 0 | 1 | 308 | 26 | 334 | Peroxidase 73 precursor, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3hdl_A | 0 | 6 | 308 | 2 | 303 | A Chain A, Crystal Structure Of Highly Glycosylated Peroxidase From Royal Palm Tree |
| PDB | 3atj_B | 0 | 5 | 308 | 2 | 306 | A Chain A, Heme Ligand Mutant Of Recombinant Horseradish Peroxidase In Complex With Benzhydroxamic Acid |
| PDB | 3atj_A | 0 | 5 | 308 | 2 | 306 | A Chain A, Heme Ligand Mutant Of Recombinant Horseradish Peroxidase In Complex With Benzhydroxamic Acid |
| PDB | 1gwt_A | 0 | 5 | 308 | 2 | 306 | A Chain A, Heme Ligand Mutant Of Recombinant Horseradish Peroxidase In Complex With Benzhydroxamic Acid |
| PDB | 1qo4_A | 0 | 5 | 308 | 2 | 304 | A Chain A, Heme Ligand Mutant Of Recombinant Horseradish Peroxidase In Complex With Benzhydroxamic Acid |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| betanidin degradation | RXN-8635 | EC-1.11.1.7 | peroxidase |
| Hydropathy |
|---|
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
| Hit | Length | Start | End | EValue |
| DT546225 | 292 | 1 | 292 | 0 |
| CK468683 | 299 | 3 | 301 | 0 |
| DW520350 | 285 | 1 | 285 | 0 |
| GT000284 | 278 | 15 | 292 | 0 |
| CO117167 | 274 | 3 | 276 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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