| Basic Information | |
|---|---|
| Species | Manihot esculenta |
| Cazyme ID | cassava4.1_024295m |
| Family | AA1 |
| Protein Properties | Length: 482 Molecular Weight: 54395.5 Isoelectric Point: 4.573 |
| Chromosome | Chromosome/Scaffold: 02943 Start: 248009 End: 250271 |
| Description | SKU5 similar 18 |
| View CDS | |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| AA1 | 21 | 475 | 0 |
| NKQVIVINDQFPGPLLNTTTNDVVDINIYNNMTVPFLMTWNGVQLRRTSWQDGVEGTNCPIPPGKNWTYSFQVKDQIGSFFYYPSLLLQKSAGGYGAIRI NNPFDVPIPFPQPFEDFDLLIGDWYNADYQDLRTSLDNGEILPSPDGILINGLPPYQAVLDFEPGVTYRLRISNVGLRTSLNFRIYDHMLLLVETEGSYT VKQYLDSLDIHVGQSYSVLVTAKNVSGESYYMVASSRFTDFELFGIGIIRYPDSAGVPDGPLPVGPFFRDYQFSVDQARSIRWDLSVGAARPNPQGSYHY GSINVTRTLVLENGVMFNGNKKAFTINGVSFLQPDTPLKLADYFQISDVFSPGVIPDIPNSNYPPVFGTSVIYANQRDFYHIVFQNPAEFLQSWHLDGYN FFVVGMDAGMWDESKIATYNMIDAVSRSTVQVYPFSWTSILVMLDNRGMWNLRSQ | |||
| Full Sequence |
|---|
| Protein Sequence Length: 482 Download |
| SPHFYYEWIV SLSYRAPLGV NKQVIVINDQ FPGPLLNTTT NDVVDINIYN NMTVPFLMTW 60 NGVQLRRTSW QDGVEGTNCP IPPGKNWTYS FQVKDQIGSF FYYPSLLLQK SAGGYGAIRI 120 NNPFDVPIPF PQPFEDFDLL IGDWYNADYQ DLRTSLDNGE ILPSPDGILI NGLPPYQAVL 180 DFEPGVTYRL RISNVGLRTS LNFRIYDHML LLVETEGSYT VKQYLDSLDI HVGQSYSVLV 240 TAKNVSGESY YMVASSRFTD FELFGIGIIR YPDSAGVPDG PLPVGPFFRD YQFSVDQARS 300 IRWDLSVGAA RPNPQGSYHY GSINVTRTLV LENGVMFNGN KKAFTINGVS FLQPDTPLKL 360 ADYFQISDVF SPGVIPDIPN SNYPPVFGTS VIYANQRDFY HIVFQNPAEF LQSWHLDGYN 420 FFVVGMDAGM WDESKIATYN MIDAVSRSTV QVYPFSWTSI LVMLDNRGMW NLRSQDAVIR 480 V* 540 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02792 | PLN02792 | 3.0e-173 | 4 | 475 | 474 | + oxidoreductase | ||
| PLN02991 | PLN02991 | 1.0e-179 | 2 | 475 | 476 | + oxidoreductase | ||
| PLN02168 | PLN02168 | 0 | 1 | 477 | 480 | + copper ion binding / pectinesterase | ||
| PLN02354 | PLN02354 | 0 | 2 | 475 | 484 | + copper ion binding / oxidoreductase | ||
| PLN02835 | PLN02835 | 0 | 1 | 474 | 474 | + oxidoreductase | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0005507 | copper ion binding |
| GO:0016491 | oxidoreductase activity |
| GO:0055114 | oxidation-reduction process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAM67203.1 | 0 | 1 | 477 | 24 | 502 | pectinesterase, putative [Arabidopsis thaliana] |
| GenBank | ABK28469.1 | 0 | 1 | 477 | 24 | 501 | unknown [Arabidopsis thaliana] |
| RefSeq | NP_177707.1 | 0 | 1 | 477 | 24 | 502 | sks18 (SKU5 Similar 18); copper ion binding / pectinesterase [Arabidopsis thaliana] |
| RefSeq | XP_001777221.1 | 0 | 2 | 476 | 23 | 497 | predicted protein [Physcomitrella patens subsp. patens] |
| RefSeq | XP_002300700.1 | 0 | 6 | 476 | 24 | 495 | predicted protein [Populus trichocarpa] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1asq_B | 0 | 5 | 475 | 5 | 508 | A Chain A, Insight Into The Mechanism Of Enzymatic Glycosyltransfer With Retention Through The Synthesis And Analysis Of Bisubstrate Glycomimetics Of Trehalose-6-Phosphate Synthase |
| PDB | 1asq_A | 0 | 5 | 475 | 5 | 508 | A Chain A, Insight Into The Mechanism Of Enzymatic Glycosyltransfer With Retention Through The Synthesis And Analysis Of Bisubstrate Glycomimetics Of Trehalose-6-Phosphate Synthase |
| PDB | 1asp_B | 0 | 5 | 475 | 5 | 508 | A Chain A, Insight Into The Mechanism Of Enzymatic Glycosyltransfer With Retention Through The Synthesis And Analysis Of Bisubstrate Glycomimetics Of Trehalose-6-Phosphate Synthase |
| PDB | 1asp_A | 0 | 5 | 475 | 5 | 508 | A Chain A, Insight Into The Mechanism Of Enzymatic Glycosyltransfer With Retention Through The Synthesis And Analysis Of Bisubstrate Glycomimetics Of Trehalose-6-Phosphate Synthase |
| PDB | 1aso_B | 0 | 5 | 475 | 5 | 508 | A Chain A, Insight Into The Mechanism Of Enzymatic Glycosyltransfer With Retention Through The Synthesis And Analysis Of Bisubstrate Glycomimetics Of Trehalose-6-Phosphate Synthase |
| Hydropathy |
|---|
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
| Hit | Length | Start | End | EValue |
| HO796073 | 472 | 24 | 476 | 0 |
| HO801725 | 399 | 77 | 474 | 0 |
| DY262568 | 346 | 38 | 383 | 0 |
| EY902768 | 223 | 22 | 244 | 0 |
| EC919612 | 304 | 22 | 325 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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