| Basic Information | |
|---|---|
| Species | Manihot esculenta |
| Cazyme ID | cassava4.1_024633m |
| Family | GT47 |
| Protein Properties | Length: 342 Molecular Weight: 38637.4 Isoelectric Point: 6.9193 |
| Chromosome | Chromosome/Scaffold: 05806 Start: 180572 End: 181993 |
| Description | Exostosin family protein |
| View CDS | |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GT47 | 230 | 337 | 1.7e-32 |
| MLKVYIYKEGERPIVHQPVLKGIYASEGWFMKLMEASKKFVTKKPRKAHLFYLPFSSRNLEMQLYVPNSHNHKNLMQYLKNYLDIIVGKYPFWNRTGGVD HFLVACHD | |||
| Full Sequence |
|---|
| Protein Sequence Length: 342 Download |
| VFQPNVHPAV DPVNNSVNIY VPEETQQTFS RESISYSLEN SSISDINDHL SEASTDFNSS 60 SGVDKHNRES SFEQPNVHSI TDTINDSPRP GVIEQSFSEE NSSSSLENTG TSNSDAAPNM 120 DNHGKSSKLK NNITISDDKS STATIPKVKK KPELPTSGVI SVSEMNSLLL RSWSSPGVRP 180 RWVSAVDQEL LRAKSQIENA PIVKNDPILY APLYWNISMF KRSYELMEDM LKVYIYKEGE 240 RPIVHQPVLK GIYASEGWFM KLMEASKKFV TKKPRKAHLF YLPFSSRNLE MQLYVPNSHN 300 HKNLMQYLKN YLDIIVGKYP FWNRTGGVDH FLVACHDWVC S* 360 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam03016 | Exostosin | 5.0e-19 | 231 | 338 | 115 | + Exostosin family. The EXT family is a family of tumour suppressor genes. Mutations of EXT1 on 8q24.1, EXT2 on 11p11-13, and EXT3 on 19p have been associated with the autosomal dominant disorder known as hereditary multiple exostoses (HME). This is the most common known skeletal dysplasia. The chromosomal locations of other EXT genes suggest association with other forms of neoplasia. EXT1 and EXT2 have both been shown to encode a heparan sulphate polymerase with both D-glucuronyl (GlcA) and N-acetyl-D-glucosaminoglycan (GlcNAC) transferase activities. The nature of the defect in heparan sulphate biosynthesis in HME is unclear. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0016020 | membrane |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CBI20855.1 | 0 | 37 | 341 | 114 | 422 | unnamed protein product [Vitis vinifera] |
| RefSeq | XP_002281263.1 | 0 | 37 | 341 | 142 | 450 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002309547.1 | 0 | 108 | 341 | 17 | 251 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002324801.1 | 0 | 165 | 338 | 1 | 175 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002516499.1 | 0 | 47 | 341 | 100 | 435 | catalytic, putative [Ricinus communis] |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| xylogalacturonan biosynthesis | RXN-9589 | EC-2.4.2.41 | xylogalacturonan β-1,3-xylosyltransferase |
| Hydropathy |
|---|
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
| Hit | Length | Start | End | EValue |
| JZ015364 | 186 | 154 | 339 | 0 |
| CV265380 | 199 | 142 | 339 | 0 |
| GR995394 | 221 | 121 | 339 | 0 |
| CV266544 | 184 | 157 | 339 | 0 |
| JG850268 | 224 | 128 | 341 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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