| Basic Information | |
|---|---|
| Species | Manihot esculenta |
| Cazyme ID | cassava4.1_024799m |
| Family | CE8 |
| Protein Properties | Length: 165 Molecular Weight: 17880.6 Isoelectric Point: 9.6443 |
| Chromosome | Chromosome/Scaffold: 06938 Start: 36697 End: 37191 |
| Description | Pectin lyase-like superfamily protein |
| View CDS | |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
 | |||
| Family | Start | End | Evalue |
| CE8 | 71 | 165 | 2.1e-24 |
| ITVSKDGKGKFKTVTDAIKSIPSQNKERAIIKIGPGVYTEKIEIEKTKPFISFLGDPKAMPTLAFGGTARKYGTHYSGTVTVDSDYFMGVNIIFQ | |||
| Full Sequence |
|---|
| Protein Sequence Length: 165 Download |
| MARGHCVDAT HCVLIAILVV ATTVSSDDTT PIPADDSKVS NWFQTNVKPW KSRKGTLDPA 60 LEAAEAKSKI ITVSKDGKGK FKTVTDAIKS IPSQNKERAI IKIGPGVYTE KIEIEKTKPF 120 ISFLGDPKAM PTLAFGGTAR KYGTHYSGTV TVDSDYFMGV NIIFQ |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
 | ||||||||
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02773 | PLN02773 | 8.0e-17 | 68 | 165 | 109 | + pectinesterase | ||
| PLN02671 | PLN02671 | 2.0e-17 | 68 | 165 | 110 | + pectinesterase | ||
| pfam01095 | Pectinesterase | 5.0e-20 | 71 | 165 | 97 | + Pectinesterase. | ||
| PLN02682 | PLN02682 | 2.0e-21 | 50 | 165 | 128 | + pectinesterase family protein | ||
| PLN02665 | PLN02665 | 3.0e-75 | 8 | 165 | 159 | + pectinesterase family protein | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0005618 | cell wall |
| GO:0030599 | pectinesterase activity |
| GO:0042545 | cell wall modification |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| RefSeq | XP_002309337.1 | 0 | 11 | 165 | 12 | 166 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002318197.1 | 0 | 7 | 165 | 4 | 162 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002333446.1 | 0 | 4 | 165 | 2 | 163 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002336983.1 | 0 | 7 | 165 | 4 | 162 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002511045.1 | 0 | 7 | 165 | 8 | 166 | Pectinesterase-1 precursor, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1gq8_A | 0.000000002 | 71 | 165 | 9 | 104 | A Chain A, Pectin Methylesterase From Carrot |
| PDB | 1xg2_A | 0.00009 | 73 | 126 | 7 | 60 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| homogalacturonan degradation | RXN-2102 | EC-3.1.1.11 | pectinesterase |
