| Basic Information | |
|---|---|
| Species | Manihot esculenta |
| Cazyme ID | cassava4.1_024973m |
| Family | CBM43 |
| Protein Properties | Length: 442 Molecular Weight: 48846.9 Isoelectric Point: 8.0832 |
| Chromosome | Chromosome/Scaffold: 03852 Start: 174852 End: 176177 |
| Description | O-Glycosyl hydrolases family 17 protein |
| View CDS | |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| CBM43 | 361 | 439 | 7.6e-25 |
| WCVAARGADLMDLARALRYACSQGNGTCDALGIGKECYEPVSVLWHASYAFSSYWAQFRSQGADCYFNGLAEQTTTNPS | |||
| GH17 | 11 | 334 | 0 |
| IGINYGRLGSNLPSAFQSIQIIQSMNVSRVKLYDANPEILKLLSGTKIHVAIMVPNHAIISIASNQSIANKWVQDNVLQYLPDTKIRFILVGNEVLSYVS EQEKIIWHNLVPAMRRIKNSLKAKKIQNIKIGAPLAMDILEITLPPSKGSFRCDISSTVIVPLLKFLNGTKSFFFIDVYPYFPWSANPSITSLDMALFKP NQNYTDPYTGFVYTNLLDQMLDSVIFAMTKLGFPDVRLSISETGWPNAGDIDQPGANIYNAATYNRNVVKRMTAKPAIGTPARPGEVIPTFIFSLYDENQ KGGPGTERHWGLLNGNGAPIYDID | |||
| Full Sequence |
|---|
| Protein Sequence Length: 442 Download |
| MADALIISSE IGINYGRLGS NLPSAFQSIQ IIQSMNVSRV KLYDANPEIL KLLSGTKIHV 60 AIMVPNHAII SIASNQSIAN KWVQDNVLQY LPDTKIRFIL VGNEVLSYVS EQEKIIWHNL 120 VPAMRRIKNS LKAKKIQNIK IGAPLAMDIL EITLPPSKGS FRCDISSTVI VPLLKFLNGT 180 KSFFFIDVYP YFPWSANPSI TSLDMALFKP NQNYTDPYTG FVYTNLLDQM LDSVIFAMTK 240 LGFPDVRLSI SETGWPNAGD IDQPGANIYN AATYNRNVVK RMTAKPAIGT PARPGEVIPT 300 FIFSLYDENQ KGGPGTERHW GLLNGNGAPI YDIDLTGNRL ETEYGPLPNP NNNKPYKGKL 360 WCVAARGADL MDLARALRYA CSQGNGTCDA LGIGKECYEP VSVLWHASYA FSSYWAQFRS 420 QGADCYFNGL AEQTTTNPSE F* |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam07983 | X8 | 5.0e-15 | 361 | 431 | 79 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
| smart00768 | X8 | 1.0e-28 | 361 | 439 | 79 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. | ||
| pfam00332 | Glyco_hydro_17 | 3.0e-103 | 11 | 334 | 325 | + Glycosyl hydrolases family 17. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAM64490.1 | 0 | 5 | 438 | 31 | 464 | beta-1,3-glucanase, putative [Arabidopsis thaliana] |
| GenBank | ABK28569.1 | 0 | 5 | 438 | 31 | 464 | unknown [Arabidopsis thaliana] |
| RefSeq | NP_189019.1 | 0 | 5 | 438 | 31 | 464 | glycosyl hydrolase family 17 protein [Arabidopsis thaliana] |
| RefSeq | XP_002298669.1 | 0 | 1 | 440 | 14 | 452 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002520622.1 | 0 | 8 | 419 | 25 | 446 | Glucan endo-1,3-beta-glucosidase precursor, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 2cyg_A | 0 | 11 | 335 | 1 | 312 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
| PDB | 3ur8_B | 0 | 11 | 338 | 3 | 317 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
| PDB | 3ur8_A | 0 | 11 | 338 | 3 | 317 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
| PDB | 3ur7_B | 0 | 11 | 338 | 3 | 317 | A Chain A, Higher-density Crystal Structure Of Potato Endo-1,3-beta-glucanase |
| PDB | 3ur7_A | 0 | 11 | 338 | 3 | 317 | A Chain A, Higher-density Crystal Structure Of Potato Endo-1,3-beta-glucanase |
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
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| Hit | Length | Start | End | EValue |
| EX051579 | 275 | 164 | 438 | 0 |
| EX050461 | 272 | 160 | 431 | 0 |
| DY302831 | 305 | 41 | 343 | 0 |
| EX050956 | 282 | 157 | 438 | 0 |
| DR944118 | 274 | 94 | 366 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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