| Basic Information | |
|---|---|
| Species | Manihot esculenta |
| Cazyme ID | cassava4.1_025630m |
| Family | GH35 |
| Protein Properties | Length: 595 Molecular Weight: 67325.1 Isoelectric Point: 5.989 |
| Chromosome | Chromosome/Scaffold: 10673 Start: 61453 End: 66691 |
| Description | Glycosyl hydrolase family 35 protein |
| View CDS | |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GH35 | 1 | 282 | 0 |
| MWPSLIAKAKEGGLDVVQTYVFWNLHEPQPGEYDFSGRYDLVKFIREIQTQGLYACLRIGPFIESEWTYGGLPFWLHDVPGIVYRSDNQPFKFYMQNFTT KIVNLMKSEGLYASQGGPIILSQIENEYGNIEAAFGENGTSYVRWAAKMAVDLQTGVPWIMCKQNDAPDPVINTCNGMRCGETFGGPNSPTKPSLWTENW TSFYQVYGGEAYIRSAQDIAFHVALFIAKNGSYVNYYMYHGGTNFGRTASAYVITGYYDQAPIDEYGLIRQPKWGHLRELHS | |||
| Full Sequence |
|---|
| Protein Sequence Length: 595 Download |
| MWPSLIAKAK EGGLDVVQTY VFWNLHEPQP GEYDFSGRYD LVKFIREIQT QGLYACLRIG 60 PFIESEWTYG GLPFWLHDVP GIVYRSDNQP FKFYMQNFTT KIVNLMKSEG LYASQGGPII 120 LSQIENEYGN IEAAFGENGT SYVRWAAKMA VDLQTGVPWI MCKQNDAPDP VINTCNGMRC 180 GETFGGPNSP TKPSLWTENW TSFYQVYGGE AYIRSAQDIA FHVALFIAKN GSYVNYYMYH 240 GGTNFGRTAS AYVITGYYDQ APIDEYGLIR QPKWGHLREL HSVIKSCSSI LLEGMQTNFS 300 LGPLQQAYVF EAQGAGCAAF LVNNNSNNAT VEFRNKSYDL LPKSISILPD CEKIVFNTAK 360 VNVESNKRIM TSTYKLKDVD KWESYRDVIP NYSDTTIRSN SLLEQMNSTK DKSDYLWYTL 420 TFQPNSSCTQ PLLHLQSLAH VAYAFVNNKF AGSAHGSKND KGPFIMEVPI ALNDDGMTNN 480 ISILSVMVGL PDSGAFLEKR YAGLTRVEIQ CTLEKDLYNF TTDYQWGYQV GVVGENLQIY 540 KGELLDSVDW WKADFSTAQP LTWFKTYGFR HTFESRVSRI SLFEKLSWIS HPLQ* 600 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam13364 | BetaGal_dom4_5 | 0.0002 | 390 | 491 | 103 | + Beta-galactosidase jelly roll domain. This domain is found in beta galactosidase enzymes. It has a jelly roll fold. | ||
| pfam02449 | Glyco_hydro_42 | 3.0e-6 | 2 | 129 | 145 | + Beta-galactosidase. This group of beta-galactosidase enzymes belong to the glycosyl hydrolase 42 family. The enzyme catalyzes the hydrolysis of terminal, non-reducing terminal beta-D-galactosidase residues. | ||
| COG1874 | LacA | 6.0e-17 | 1 | 260 | 313 | + Beta-galactosidase [Carbohydrate transport and metabolism] | ||
| pfam01301 | Glyco_hydro_35 | 2.0e-136 | 1 | 284 | 298 | + Glycosyl hydrolases family 35. | ||
| PLN03059 | PLN03059 | 0 | 1 | 566 | 580 | + beta-galactosidase; Provisional | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CAN82672.1 | 0 | 1 | 565 | 56 | 589 | hypothetical protein [Vitis vinifera] |
| EMBL | CBI21611.1 | 0 | 1 | 565 | 56 | 623 | unnamed protein product [Vitis vinifera] |
| RefSeq | XP_002274012.1 | 0 | 1 | 565 | 92 | 652 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002306647.1 | 0 | 1 | 566 | 32 | 586 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002307056.1 | 0 | 1 | 565 | 55 | 617 | predicted protein [Populus trichocarpa] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3d3a_A | 1e-34 | 2 | 280 | 39 | 325 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
| PDB | 3thd_D | 1e-25 | 2 | 280 | 42 | 330 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
| PDB | 3thd_C | 1e-25 | 2 | 280 | 42 | 330 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
| PDB | 3thd_B | 1e-25 | 2 | 280 | 42 | 330 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
| PDB | 3thd_A | 1e-25 | 2 | 280 | 42 | 330 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| lactose degradation III | BETAGALACTOSID-RXN | EC-3.2.1.23 | β-galactosidase |
| Hydropathy |
|---|
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
| Hit | Length | Start | End | EValue |
| HO778160 | 586 | 1 | 567 | 0 |
| HO780602 | 557 | 21 | 566 | 0 |
| CO074493 | 292 | 70 | 360 | 0 |
| FY449371 | 266 | 107 | 371 | 0 |
| EL473915 | 272 | 40 | 310 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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