| Basic Information | |
|---|---|
| Species | Manihot esculenta |
| Cazyme ID | cassava4.1_025638m |
| Family | GH3 |
| Protein Properties | Length: 772 Molecular Weight: 84948.3 Isoelectric Point: 9.0446 |
| Chromosome | Chromosome/Scaffold: 12455 Start: 449664 End: 452753 |
| Description | Glycosyl hydrolase family protein |
| View CDS | |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GH3 | 75 | 332 | 0 |
| IPRLGIPSYHWWGEALHGIVYVGNATYGINFNGTIRSATSFPQVLLTTASFNPQIWFRIGQVIGEEARALYNAGQATGLTFWSPNINIFRDPRWGRGQET PGEDPLVAGKYAMLFVRGVQGDSFEGGKLGVGDHLQASACCKHFTAYDLDNWKGVSTLVFDARVTLQDLADTFQPPFHSCIVEGKASGIMCAYNRVNGVP NCADYNLLSKTARGKWGFQGYIVSDCYAVAQLHDNQGYAKSPEDAVADVLKAGMDVDC | |||
| Full Sequence |
|---|
| Protein Sequence Length: 772 Download |
| MKSHFSMPHL SFYFLQVHSV ESVSPPFACD FSNPSTKLYP FCKTTLSISQ RVQDLISRLT 60 FDEKIAQLAY AAPPIPRLGI PSYHWWGEAL HGIVYVGNAT YGINFNGTIR SATSFPQVLL 120 TTASFNPQIW FRIGQVIGEE ARALYNAGQA TGLTFWSPNI NIFRDPRWGR GQETPGEDPL 180 VAGKYAMLFV RGVQGDSFEG GKLGVGDHLQ ASACCKHFTA YDLDNWKGVS TLVFDARVTL 240 QDLADTFQPP FHSCIVEGKA SGIMCAYNRV NGVPNCADYN LLSKTARGKW GFQGYIVSDC 300 YAVAQLHDNQ GYAKSPEDAV ADVLKAGMDV DCGGYVSNHT KSAIKQKKLG ESEIDRALGN 360 LFSVRMRLGL FNGNPLKLPY GNIGSDKVCS KEHQDLALEA AREGIVLLKN SVKFLPLKKS 420 KTRSLAVVGH NADEPQTILG SYKGLPCNIV TPLQALQKYV KKVRHHRGCD TAGCTSASID 480 KAVRIARVVD HVVLIIGLDQ TQEREGLDRL NLVLPGKQQE LIRKVAKAAK KPVVLVILSG 540 GPIDITFAKN DNKIGSILWA GYPGEAGGTA LAEIIFGDYN PGGRLPVTWY PQDFTKVQMV 600 DMRMRSEPSS GYPGRTYRFY GGKKVFEFGY GLSYTNYSYN FISVSRTNIT FYKRKSNLNS 660 YILVSDLGTE LCENSKFWVT IGVENTGMMA GRHPVLVFAK QAKLGNGKPL KQLVGFQSVK 720 LNAKAKAEIK YELNPCEHLT RANEDGSMVI DEGLYYFIVG SEEYPLTVIV A* 780 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| COG1472 | BglX | 5.0e-51 | 69 | 435 | 378 | + Beta-glucosidase-related glycosidases [Carbohydrate transport and metabolism] | ||
| pfam01915 | Glyco_hydro_3_C | 1.0e-55 | 405 | 635 | 238 | + Glycosyl hydrolase family 3 C-terminal domain. This domain is involved in catalysis and may be involved in binding beta-glucan. This domain is found associated with pfam00933. | ||
| pfam00933 | Glyco_hydro_3 | 7.0e-63 | 60 | 357 | 327 | + Glycosyl hydrolase family 3 N terminal domain. | ||
| PRK15098 | PRK15098 | 3.0e-77 | 52 | 735 | 755 | + beta-D-glucoside glucohydrolase; Provisional | ||
| PLN03080 | PLN03080 | 0 | 21 | 768 | 766 | + Probable beta-xylosidase; Provisional | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CBI19138.1 | 0 | 1 | 765 | 1 | 747 | unnamed protein product [Vitis vinifera] |
| EMBL | CBI19138.1 | 0 | 22 | 769 | 693 | 1410 | unnamed protein product [Vitis vinifera] |
| RefSeq | XP_002302285.1 | 0 | 15 | 770 | 16 | 773 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002306583.1 | 0 | 10 | 770 | 11 | 745 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002513892.1 | 0 | 10 | 770 | 12 | 774 | Periplasmic beta-glucosidase precursor, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3u48_B | 0 | 135 | 760 | 106 | 722 | A Chain A, Crystal Structure Of Desr, A Beta-glucosidase From Streptomyces Venezuelae In Complex With D-glucose. |
| PDB | 3u48_A | 0 | 135 | 760 | 106 | 722 | A Chain A, Crystal Structure Of Desr, A Beta-glucosidase From Streptomyces Venezuelae In Complex With D-glucose. |
| PDB | 3u4a_B | 0 | 135 | 760 | 106 | 722 | A Chain A, Crystal Structure Of Desr, A Beta-glucosidase From Streptomyces Venezuelae In Complex With D-glucose. |
| PDB | 3u4a_A | 0 | 135 | 760 | 106 | 722 | A Chain A, Crystal Structure Of Desr, A Beta-glucosidase From Streptomyces Venezuelae In Complex With D-glucose. |
| PDB | 2x41_A | 0 | 50 | 761 | 2 | 700 | A Chain A, Crystal Structure Of Desr, A Beta-glucosidase From Streptomyces Venezuelae In Complex With D-glucose. |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| (1,4)-β-xylan degradation | 3.2.1.37-RXN | EC-3.2.1.37 | xylan 1,4-β-xylosidase |
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
| Hit | Length | Start | End | EValue |
| DW486060 | 302 | 43 | 344 | 0 |
| CF212861 | 319 | 35 | 353 | 0 |
| DY273227 | 336 | 2 | 336 | 0 |
| DY910269 | 285 | 20 | 304 | 0 |
| FC912034 | 297 | 2 | 297 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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