| Basic Information | |
|---|---|
| Species | Manihot esculenta |
| Cazyme ID | cassava4.1_026066m |
| Family | GT19 |
| Protein Properties | Length: 302 Molecular Weight: 33536.9 Isoelectric Point: 8.0183 |
| Chromosome | Chromosome/Scaffold: 07933 Start: 89802 End: 91697 |
| Description | transferases, transferring glycosyl groups |
| View CDS | |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| GT19 | 30 | 289 | 0 |
| VFIVAGEVSGDTIGSRLMASLKKLSPTPIRFSGVGGSMMSKEGLVSLFPMENIAVMGIWELLPHLNKIRAKLKETVEAAFLFRPHVVVTVDAKGYSWQRW DNPVHFHYVAPSFWAWKGGEARLGGLANFVDHIFCILPNEEAVCNSNGLPATFVGHPTLEDVFELNLGKQTSPFECKIEGKGEDFRSKFAIPPGAPIISL LPGSRLQEVTRMLSIFATTMEQLKDHLLELVTVIHIAPNQDVENYIRGSVNKWPVPAILV | |||
| Full Sequence |
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| Protein Sequence Length: 302 Download |
| MSFLRLFRRY VSISSRAVMD IASKDGELRV FIVAGEVSGD TIGSRLMASL KKLSPTPIRF 60 SGVGGSMMSK EGLVSLFPME NIAVMGIWEL LPHLNKIRAK LKETVEAAFL FRPHVVVTVD 120 AKGYSWQRWD NPVHFHYVAP SFWAWKGGEA RLGGLANFVD HIFCILPNEE AVCNSNGLPA 180 TFVGHPTLED VFELNLGKQT SPFECKIEGK GEDFRSKFAI PPGAPIISLL PGSRLQEVTR 240 MLSIFATTME QLKDHLLELV TVIHIAPNQD VENYIRGSVN KWPVPAILVP GCQPHTKYDA 300 FS |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PRK01021 | lpxB | 8.0e-28 | 31 | 244 | 230 | + lipid-A-disaccharide synthase; Reviewed | ||
| TIGR00215 | lpxB | 2.0e-30 | 30 | 263 | 244 | + lipid-A-disaccharide synthase. Lipid-A precursor biosynthesis producing lipid A disaccharide in a condensation reaction. transcribed as part of an operon including lpxA [Cell envelope, Biosynthesis and degradation of surface polysaccharides and lipopolysaccharides]. | ||
| pfam02684 | LpxB | 1.0e-41 | 30 | 253 | 231 | + Lipid-A-disaccharide synthetase. This is a family of lipid-A-disaccharide synthetases, EC:2.4.2.128. These enzymes catalyze the reaction: UDP-2,3-bis(3-hydroxytetradecanoyl) glucosamine + 2,3-bis(3-hydroxytetradecanoyl)-beta-D-glucosaminyl 1-phosphate <=> UDP + 2,3-bis(3-hydroxytetradecanoyl)-D-glucosaminyl-1,6 -beta-D-2,3-bis(3-hydroxytetradecanoyl)-beta-D-glucosaminyl 1-phosphate. These enzymes catalyze the fist disaccharide step in the synthesis of lipid-A-disaccharide. | ||
| COG0763 | LpxB | 1.0e-61 | 28 | 302 | 284 | + Lipid A disaccharide synthetase [Cell envelope biogenesis, outer membrane] | ||
| PRK00025 | lpxB | 2.0e-64 | 28 | 302 | 285 | + lipid-A-disaccharide synthase; Reviewed | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0008915 | lipid-A-disaccharide synthase activity |
| GO:0009245 | lipid A biosynthetic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CBI28885.1 | 0 | 21 | 302 | 1 | 294 | unnamed protein product [Vitis vinifera] |
| RefSeq | NP_001140462.1 | 0 | 12 | 302 | 23 | 324 | hypothetical protein LOC100272521 [Zea mays] |
| RefSeq | NP_178535.2 | 0 | 8 | 301 | 19 | 318 | transferase, transferring glycosyl groups [Arabidopsis thaliana] |
| RefSeq | XP_002458499.1 | 0 | 12 | 302 | 3 | 304 | hypothetical protein SORBIDRAFT_03g034785 [Sorghum bicolor] |
| RefSeq | XP_002528957.1 | 0 | 3 | 302 | 20 | 332 | Lipid-A-disaccharide synthase, putative [Ricinus communis] |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| lipid IVA biosynthesis | LIPIDADISACCHARIDESYNTH-RXN | EC-2.4.1.182 | lipid-A-disaccharide synthase |
| Hydropathy |
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| EST Download unfiltered results here | ||||
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| Hit | Length | Start | End | EValue |
| EY717263 | 237 | 66 | 302 | 0 |
| FY429474 | 255 | 6 | 246 | 0 |
| DT652350 | 250 | 12 | 250 | 0 |
| DV519136 | 253 | 12 | 253 | 0 |
| DR962527 | 242 | 12 | 242 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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| Phylogeny |
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