| Basic Information | |
|---|---|
| Species | Manihot esculenta |
| Cazyme ID | cassava4.1_026286m |
| Family | CBM43 |
| Protein Properties | Length: 239 Molecular Weight: 24524.3 Isoelectric Point: 7.3338 |
| Chromosome | Chromosome/Scaffold: 07520 Start: 750909 End: 752001 |
| Description | Carbohydrate-binding X8 domain superfamily protein |
| View CDS | |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| CBM43 | 98 | 180 | 2.7e-35 |
| WCVASPSASPTALQVALDYACGYGGADCSEIQGGGSCYDPNTVRDHASYAFNNYYQKNPIPSSCNFGGTAVTTSTNPSSGTCH | |||
| Full Sequence |
|---|
| Protein Sequence Length: 239 Download |
| MGGRVIYSLL FFLCGTRIAA VGHSSKQDNG ALQLHRLTSI STSQKDITTP ITTVPTTIPT 60 NIPTSSTPIV NSNSDPDSTS PVITPTTTPS PVSPGASWCV ASPSASPTAL QVALDYACGY 120 GGADCSEIQG GGSCYDPNTV RDHASYAFNN YYQKNPIPSS CNFGGTAVTT STNPSSGTCH 180 YPSTSISSSV LNITNSNGAT VYGAVPSSPS NPAAASAKIS NQINFRLIVF FIIMVAAI* 240 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam07983 | X8 | 5.0e-21 | 97 | 168 | 78 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
| smart00768 | X8 | 4.0e-37 | 97 | 181 | 86 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. | ||
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | EEC79758.1 | 1.4013e-45 | 27 | 213 | 36 | 211 | hypothetical protein OsI_21142 [Oryza sativa Indica Group] |
| GenBank | EEE64827.1 | 2.8026e-45 | 27 | 213 | 36 | 211 | hypothetical protein OsJ_19684 [Oryza sativa Japonica Group] |
| RefSeq | NP_001031450.1 | 0 | 74 | 234 | 53 | 219 | unknown protein [Arabidopsis thaliana] |
| RefSeq | XP_002283721.1 | 0 | 1 | 203 | 1 | 204 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002441577.1 | 0 | 1 | 214 | 1 | 189 | hypothetical protein SORBIDRAFT_09g029700 [Sorghum bicolor] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 2jon_A | 2e-19 | 86 | 185 | 2 | 100 | A Chain A, Solution Structure Of The C-Terminal Domain Ole E 9 |
