| Basic Information | |
|---|---|
| Species | Manihot esculenta |
| Cazyme ID | cassava4.1_026328m |
| Family | CE8 |
| Protein Properties | Length: 208 Molecular Weight: 22363.8 Isoelectric Point: 8.6097 |
| Chromosome | Chromosome/Scaffold: 09209 Start: 60099 End: 60807 |
| Description | Pectin lyase-like superfamily protein |
| View CDS | |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| CE8 | 71 | 206 | 1.19951e-42 |
| ITLSKDGRGEFKTLTDAIKSIPLDNKQRVIIKIGPGVYTEKIQIERNKPFITLLGDPKAMPTLAFGGTAHQYGTLYSATIAVESEYFMAVNIIFKNTAPG PITKNPGAQAVALRVSGDKAAFYNCQMLGFQDTLCD | |||
| Full Sequence |
|---|
| Protein Sequence Length: 208 Download |
| MAKGHCIAAT HCVLIAILVV ATTVSSDDTT PIPADDSKVS NWFKTMVKPL VSRKGTLDPA 60 LEAAEAKSRT ITLSKDGRGE FKTLTDAIKS IPLDNKQRVI IKIGPGVYTE KIQIERNKPF 120 ITLLGDPKAM PTLAFGGTAH QYGTLYSATI AVESEYFMAV NIIFKNTAPG PITKNPGAQA 180 VALRVSGDKA AFYNCQMLGF QDTLCDDN 240 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02773 | PLN02773 | 4.0e-35 | 68 | 204 | 148 | + pectinesterase | ||
| PLN02634 | PLN02634 | 9.0e-36 | 69 | 207 | 146 | + probable pectinesterase | ||
| pfam01095 | Pectinesterase | 2.0e-40 | 71 | 204 | 136 | + Pectinesterase. | ||
| PLN02682 | PLN02682 | 8.0e-47 | 50 | 206 | 169 | + pectinesterase family protein | ||
| PLN02665 | PLN02665 | 5.0e-114 | 7 | 207 | 202 | + pectinesterase family protein | ||
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| RefSeq | XP_002309337.1 | 0 | 11 | 207 | 12 | 208 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002318197.1 | 0 | 7 | 207 | 4 | 204 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002333446.1 | 0 | 4 | 207 | 2 | 205 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002336983.1 | 0 | 7 | 207 | 4 | 204 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002511043.1 | 0 | 1 | 207 | 1 | 207 | Pectinesterase-1 precursor, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1gq8_A | 1e-20 | 71 | 204 | 9 | 138 | A Chain A, Pectin Methylesterase From Carrot |
| PDB | 1xg2_A | 0.0000000000004 | 73 | 204 | 7 | 134 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
| PDB | 1qjv_B | 0.000000002 | 74 | 204 | 12 | 156 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
| PDB | 1qjv_A | 0.000000002 | 74 | 204 | 12 | 156 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
| PDB | 2ntq_B | 0.000000002 | 74 | 204 | 12 | 156 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| homogalacturonan degradation | RXN-2102 | EC-3.1.1.11 | pectinesterase |
