| Basic Information | |
|---|---|
| Species | Manihot esculenta |
| Cazyme ID | cassava4.1_026371m |
| Family | GT47 |
| Protein Properties | Length: 564 Molecular Weight: 64566.1 Isoelectric Point: 7.4469 |
| Chromosome | Chromosome/Scaffold: 05280 Start: 227470 End: 229161 |
| Description | root hair specific 8 |
| View CDS | |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GT47 | 178 | 505 | 0 |
| CDGRGIYVYDLPSKFNKDLVGQCGDMILWMDFCKYFDNEALGRPIEKLGKCWYDTHQYSLEPIFHQRILKHPCRVYSENEAKLFYVPYYGGLDILRWHFK NVSNDVKDILALELMKWLDSKKPWVQNSGKDHVFVLGKISWDFRRINDSSWGTRFLQLEKMQNPIKLLIERQPWEVNDIGIPHPTYFHPHSDDDIVAWQL KIIQATRKSLVSFAGAARPDQPESIRSILINQCTSAGDKCQFLNCRSSECDQPETITELFMESEFCLQPPGDSPTRKSVFDSLVSGCIPVIFDPFTAYYQ YPWHLPEDHGKYSVFIDQEEVRKMKVNV | |||
| Full Sequence |
|---|
| Protein Sequence Length: 564 Download |
| MAIAVSKKKT RLPRKSKEGR KEFCFCSAIW LQILSRIPAL TVLLILLFLW SSSTTIISGN 60 IVHVCISSRK LSNLYCLSAG SQPSFEIPNI NNGSTSVRPS DVIREINVSS SINDSVKEVG 120 VVVSPINNNI TGIANVVGKY PNLIVTDRNE EVENAKKIVE EQLQLHRSWT SNTNPAVCDG 180 RGIYVYDLPS KFNKDLVGQC GDMILWMDFC KYFDNEALGR PIEKLGKCWY DTHQYSLEPI 240 FHQRILKHPC RVYSENEAKL FYVPYYGGLD ILRWHFKNVS NDVKDILALE LMKWLDSKKP 300 WVQNSGKDHV FVLGKISWDF RRINDSSWGT RFLQLEKMQN PIKLLIERQP WEVNDIGIPH 360 PTYFHPHSDD DIVAWQLKII QATRKSLVSF AGAARPDQPE SIRSILINQC TSAGDKCQFL 420 NCRSSECDQP ETITELFMES EFCLQPPGDS PTRKSVFDSL VSGCIPVIFD PFTAYYQYPW 480 HLPEDHGKYS VFIDQEEVRK MKVNVVERLM NVSAKEREDM RRYIIYEMLP GLVYGDSSSQ 540 LHKFQDAFSI TVNNLVNRLQ LLD* 600 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam03016 | Exostosin | 7.0e-68 | 178 | 512 | 350 | + Exostosin family. The EXT family is a family of tumour suppressor genes. Mutations of EXT1 on 8q24.1, EXT2 on 11p11-13, and EXT3 on 19p have been associated with the autosomal dominant disorder known as hereditary multiple exostoses (HME). This is the most common known skeletal dysplasia. The chromosomal locations of other EXT genes suggest association with other forms of neoplasia. EXT1 and EXT2 have both been shown to encode a heparan sulphate polymerase with both D-glucuronyl (GlcA) and N-acetyl-D-glucosaminoglycan (GlcNAC) transferase activities. The nature of the defect in heparan sulphate biosynthesis in HME is unclear. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0016020 | membrane |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CBI34680.1 | 0 | 1 | 563 | 456 | 993 | unnamed protein product [Vitis vinifera] |
| RefSeq | NP_176534.2 | 0 | 1 | 559 | 24 | 660 | catalytic [Arabidopsis thaliana] |
| RefSeq | XP_002269913.1 | 0 | 1 | 563 | 1 | 538 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002299537.1 | 0 | 1 | 562 | 1 | 572 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002509789.1 | 0 | 1 | 560 | 1 | 567 | Xyloglucan galactosyltransferase KATAMARI1, putative [Ricinus communis] |
