| Basic Information | |
|---|---|
| Species | Manihot esculenta |
| Cazyme ID | cassava4.1_026436m |
| Family | GH10 |
| Protein Properties | Length: 418 Molecular Weight: 47342.3 Isoelectric Point: 6.8554 |
| Chromosome | Chromosome/Scaffold: 00396 Start: 126970 End: 128787 |
| Description | Glycosyl hydrolase superfamily protein |
| View CDS | |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GH10 | 91 | 349 | 0 |
| QSSIPFGCSMNHHILESSAYQNWFTSRFKYTTFTNEMKWYSTEIIQGHEDYTIADAMVRFAKRNGISIRGHNIFWDDPRYQQPWVKNLSPNDSRKAAAKR INSVVSRYAGQLIAWDVMNENLHFSFHEDKLGVNASAEYFSRAFQLHPKTRLFMNEFNTIEDRRDEAASPANYKRILEQILSYPGNKEILAGISVQGDFS YGQPDLAYMRASLDILASTGLPIWLTEVSLDAGPNQAEYLEQVLREGRSHPGVEGIIMF | |||
| Full Sequence |
|---|
| Protein Sequence Length: 418 Download |
| ESPTATTSRG FAKGGVFANF SGHAELLFQS KNTNVEMWID NVSLQPFTME QWRSHQKERI 60 HWEHKRKVTF QVKYANKTAV KGATVSIKQI QSSIPFGCSM NHHILESSAY QNWFTSRFKY 120 TTFTNEMKWY STEIIQGHED YTIADAMVRF AKRNGISIRG HNIFWDDPRY QQPWVKNLSP 180 NDSRKAAAKR INSVVSRYAG QLIAWDVMNE NLHFSFHEDK LGVNASAEYF SRAFQLHPKT 240 RLFMNEFNTI EDRRDEAASP ANYKRILEQI LSYPGNKEIL AGISVQGDFS YGQPDLAYMR 300 ASLDILASTG LPIWLTEVSL DAGPNQAEYL EQVLREGRSH PGVEGIIMFA GPEIAGFNVT 360 TLADKDFKNT PAGDVGDKLI DEWKFTIAEG SIEVSLFHGD YNITVKNLVN LVVSTLE* 420 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| COG3693 | XynA | 2.0e-27 | 125 | 317 | 206 | + Beta-1,4-xylanase [Carbohydrate transport and metabolism] | ||
| pfam00331 | Glyco_hydro_10 | 1.0e-42 | 95 | 372 | 308 | + Glycosyl hydrolase family 10. | ||
| smart00633 | Glyco_10 | 2.0e-68 | 127 | 375 | 272 | + Glycosyl hydrolase family 10. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| RefSeq | XP_002313181.1 | 0 | 13 | 410 | 147 | 550 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002313182.1 | 0 | 13 | 416 | 118 | 527 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002313183.1 | 0 | 13 | 416 | 80 | 489 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002532419.1 | 0 | 13 | 416 | 120 | 530 | hydrolase, hydrolyzing O-glycosyl compounds, putative [Ricinus communis] |
| RefSeq | XP_002532422.1 | 0 | 13 | 407 | 136 | 536 | hydrolase, hydrolyzing O-glycosyl compounds, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1tux_A | 2e-19 | 96 | 333 | 18 | 252 | A Chain A, High Resolution Crystal Structure Of A Thermostable Xylanase From Thermoascus Aurantiacus |
| PDB | 1i1x_A | 4e-19 | 96 | 333 | 18 | 252 | A Chain A, High Resolution Crystal Structure Of A Thermostable Xylanase From Thermoascus Aurantiacus |
| PDB | 1i1w_A | 4e-19 | 96 | 333 | 18 | 252 | A Chain A, 0.89a Ultra High Resolution Structure Of A Thermostable Xylanase From Thermoascus Aurantiacus |
| PDB | 1nq6_A | 7e-19 | 96 | 375 | 15 | 297 | A Chain A, Crystal Structure Of The Catalytic Domain Of Xylanase A From Streptomyces Halstedii Jm8 |
| PDB | 2bnj_A | 7e-19 | 96 | 333 | 18 | 252 | A Chain A, The Xylanase Ta From Thermoascus Aurantiacus Utilizes Arabinose Decorations Of Xylan As Significant Substrate Specificity Determinants |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| (1,4)-β-xylan degradation | 3.2.1.8-RXN | EC-3.2.1.8 | endo-1,4-β-xylanase |
| Hydropathy |
|---|
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
| Hit | Length | Start | End | EValue |
| DV141191 | 250 | 85 | 334 | 0 |
| DV140884 | 220 | 115 | 334 | 0 |
| EX266128 | 275 | 109 | 383 | 0 |
| GW616967 | 219 | 42 | 260 | 0 |
| ES843603 | 250 | 131 | 380 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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