| Basic Information | |
|---|---|
| Species | Manihot esculenta |
| Cazyme ID | cassava4.1_026972m |
| Family | CE8 |
| Protein Properties | Length: 573 Molecular Weight: 62826.6 Isoelectric Point: 9.8711 |
| Chromosome | Chromosome/Scaffold: 04002 Start: 68304 End: 70131 |
| Description | root hair specific 12 |
| View CDS | |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| CE8 | 266 | 557 | 0 |
| DVIVAQDGSGKYKRIGDALKSVPNKSKKRFVIYVKKGIYNENVRVEKSKWNVMIIGDGMDATTVSGSLNFVDGTPTFSSATFAVFGKGFIARDMGFQNTA GANKHQAVALMSNGDHSVFYQCSFNAFQDTLYAHSNRQFYRECNIYGTVDFIFGNSAVVIQNCKILPRKPMLGQQNTITAQGRFDPNQNTGISIQNCTIQ PFGNLTTTKTFLGRPWKNYSTTVYMNSMMGSLIDPSGWLPWTGNTAPPTIFYAEYQNLGPGASTKNRVKWKGLKSITKKLASQFTVKAFLKG | |||
| Full Sequence |
|---|
| Protein Sequence Length: 573 Download |
| MSSLKAYGKV DEAEQARLDA RRRTRKRITI ISISSILLVT TVVAAVVGTR ASSGNSENGG 60 DQAKYLSASV KAVCDVTLYK DSCYSSLAPL AKSNQLHPEE LFSLSIQVAM NELSKASQYF 120 STKSGSLFGG VTDSMTIAAL KDCNDLLGLA MDHLNSSLSS AGDVSMLDAV DDLRSWLSAA 180 GSSQQTCIDG LGETNLKNYA QNYLKTTSEL TSNSLAIITW IYKAASSVKM RRLMNYGEQE 240 KVEMPKWLHQ RDRQLLQTKD LKKMADVIVA QDGSGKYKRI GDALKSVPNK SKKRFVIYVK 300 KGIYNENVRV EKSKWNVMII GDGMDATTVS GSLNFVDGTP TFSSATFAVF GKGFIARDMG 360 FQNTAGANKH QAVALMSNGD HSVFYQCSFN AFQDTLYAHS NRQFYRECNI YGTVDFIFGN 420 SAVVIQNCKI LPRKPMLGQQ NTITAQGRFD PNQNTGISIQ NCTIQPFGNL TTTKTFLGRP 480 WKNYSTTVYM NSMMGSLIDP SGWLPWTGNT APPTIFYAEY QNLGPGASTK NRVKWKGLKS 540 ITKKLASQFT VKAFLKGDTW IPQTGISYNS GL* 600 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02713 | PLN02713 | 2.0e-164 | 72 | 572 | 535 | + Probable pectinesterase/pectinesterase inhibitor | ||
| PLN02745 | PLN02745 | 9.0e-165 | 62 | 572 | 529 | + Putative pectinesterase/pectinesterase inhibitor | ||
| PLN02468 | PLN02468 | 0 | 4 | 572 | 570 | + putative pectinesterase/pectinesterase inhibitor | ||
| PLN02314 | PLN02314 | 0 | 3 | 572 | 590 | + pectinesterase | ||
| pfam01095 | Pectinesterase | 0 | 266 | 558 | 298 | + Pectinesterase. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004857 | enzyme inhibitor activity |
| GO:0005618 | cell wall |
| GO:0030599 | pectinesterase activity |
| GO:0042545 | cell wall modification |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CBI29155.1 | 0 | 1 | 572 | 1 | 561 | unnamed protein product [Vitis vinifera] |
| RefSeq | XP_002273396.1 | 0 | 1 | 572 | 4 | 564 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002311918.1 | 0 | 1 | 572 | 1 | 568 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002316458.1 | 0 | 1 | 572 | 1 | 569 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002515781.1 | 0 | 1 | 572 | 1 | 573 | Pectinesterase-3 precursor, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1xg2_A | 0 | 264 | 572 | 2 | 315 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
| PDB | 1gq8_A | 0 | 266 | 572 | 8 | 319 | A Chain A, Pectin Methylesterase From Carrot |
| PDB | 2ntq_B | 1e-20 | 267 | 562 | 7 | 339 | A Chain A, Pectin Methylesterase From Carrot |
| PDB | 2ntq_A | 1e-20 | 267 | 562 | 7 | 339 | A Chain A, Pectin Methylesterase From Carrot |
| PDB | 2ntp_B | 1e-20 | 267 | 562 | 7 | 339 | A Chain A, Pectin Methylesterase From Carrot |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| homogalacturonan degradation | RXN-2102 | EC-3.1.1.11 | pectinesterase |
