| Basic Information | |
|---|---|
| Species | Manihot esculenta |
| Cazyme ID | cassava4.1_027475m |
| Family | CBM43 |
| Protein Properties | Length: 487 Molecular Weight: 53746.8 Isoelectric Point: 7.4614 |
| Chromosome | Chromosome/Scaffold: 10954 Start: 123872 End: 125425 |
| Description | O-Glycosyl hydrolases family 17 protein |
| View CDS | |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| CBM43 | 373 | 453 | 1.2e-25 |
| WCVLNDEVKEESLIPSALSYACYHSDCTSLSPGSSCGNFNLRGNASYAFNMYFQMSSQDVDACDFNGLGLIVTRNASRGTC | |||
| GH17 | 30 | 350 | 0 |
| VGVNWGNLASHPLPPKIVVKMLKDNGITKVKLFDADSWTLNSLAGSNLEVMVGIPNNMLDYISDSLDNAKDWVKENVTSHLKPKGDKNGVDIRYVAVGNE PFLESYEGKFDDTTFPAIQNVQKALDEAGVGDKIKASTALNADVYAGDKPSQGYFRSDVRDVMLKIVKHLKKNKAPFIVNIYPFLSVYQTTGFPLEYAFF EGSSRKVHDKNVSYSNVFDANYDTLVWALHKAGAPDLKIIIGEVGWPTDASKYATPKYAQKFYDGLLKKLAEKKGTPLRPGMLSVYLFGLLDEDMKSILP GFFERHWGLFRYDGQPKFPMD | |||
| Full Sequence |
|---|
| Protein Sequence Length: 487 Download |
| MAAGACSVLL WSFCMLNIVQ VAVSAVVPGV GVNWGNLASH PLPPKIVVKM LKDNGITKVK 60 LFDADSWTLN SLAGSNLEVM VGIPNNMLDY ISDSLDNAKD WVKENVTSHL KPKGDKNGVD 120 IRYVAVGNEP FLESYEGKFD DTTFPAIQNV QKALDEAGVG DKIKASTALN ADVYAGDKPS 180 QGYFRSDVRD VMLKIVKHLK KNKAPFIVNI YPFLSVYQTT GFPLEYAFFE GSSRKVHDKN 240 VSYSNVFDAN YDTLVWALHK AGAPDLKIII GEVGWPTDAS KYATPKYAQK FYDGLLKKLA 300 EKKGTPLRPG MLSVYLFGLL DEDMKSILPG FFERHWGLFR YDGQPKFPMD LSGKGHDKML 360 IGAKGVQYMT KQWCVLNDEV KEESLIPSAL SYACYHSDCT SLSPGSSCGN FNLRGNASYA 420 FNMYFQMSSQ DVDACDFNGL GLIVTRNASR GTCLFPVQVV SQGERVLLGY GVNIFLVFVM 480 SFFIFM* 540 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| COG5309 | COG5309 | 0.004 | 268 | 342 | 79 | + Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] | ||
| pfam07983 | X8 | 2.0e-17 | 372 | 441 | 77 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
| smart00768 | X8 | 4.0e-29 | 372 | 455 | 86 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. | ||
| pfam00332 | Glyco_hydro_17 | 3.0e-73 | 33 | 350 | 321 | + Glycosyl hydrolases family 17. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CAN62816.1 | 0 | 6 | 466 | 4 | 461 | hypothetical protein [Vitis vinifera] |
| RefSeq | NP_201284.1 | 0 | 21 | 461 | 19 | 457 | glycosyl hydrolase family 17 protein [Arabidopsis thaliana] |
| RefSeq | XP_002275701.1 | 0 | 6 | 466 | 4 | 461 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002310612.1 | 0 | 8 | 486 | 6 | 485 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002530257.1 | 0 | 3 | 465 | 2 | 461 | Glucan endo-1,3-beta-glucosidase precursor, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3ur8_B | 0 | 30 | 352 | 3 | 315 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
| PDB | 3ur8_A | 0 | 30 | 352 | 3 | 315 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
| PDB | 3ur7_B | 0 | 30 | 352 | 3 | 315 | A Chain A, Higher-density Crystal Structure Of Potato Endo-1,3-beta-glucanase |
| PDB | 3ur7_A | 0 | 30 | 352 | 3 | 315 | A Chain A, Higher-density Crystal Structure Of Potato Endo-1,3-beta-glucanase |
| PDB | 4gzj_A | 0 | 30 | 352 | 3 | 315 | A Chain A, Higher-density Crystal Structure Of Potato Endo-1,3-beta-glucanase |
