| Basic Information | |
|---|---|
| Species | Manihot esculenta |
| Cazyme ID | cassava4.1_027486m |
| Family | CBM43 |
| Protein Properties | Length: 263 Molecular Weight: 26696.4 Isoelectric Point: 4.0668 |
| Chromosome | Chromosome/Scaffold: 06582 Start: 216139 End: 217684 |
| Description | Carbohydrate-binding X8 domain superfamily protein |
| View CDS | |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| CBM43 | 97 | 179 | 1.2e-33 |
| WCIASPTASETALQVALDYACGYGGADCSAIQPGGSCYNQNTVRDHASYAFNDYYQKNPIPTSCVFGGTAQLSSTDPSNGNCH | |||
| Full Sequence |
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| Protein Sequence Length: 263 Download |
| SSVAETPPLE AIQENRIADH RENQILFSSP VFTTQLDTMG TVPIVNPTTP GTTSPIVNPI 60 DSPPAPTAVT TTPPTTPDTT TPTTPATTTP TSSGGAWCIA SPTASETALQ VALDYACGYG 120 GADCSAIQPG GSCYNQNTVR DHASYAFNDY YQKNPIPTSC VFGGTAQLSS TDPSNGNCHY 180 ASAHSTPSSS PPPPTTPTTP TTTTPTPTTM TPPITTTPGG PTIYGVAEPT GLPSSATSVS 240 FSLLLLCSTT AIVGSLLAAN NF* 300 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam07983 | X8 | 2.0e-21 | 97 | 166 | 76 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
| smart00768 | X8 | 3.0e-36 | 97 | 180 | 85 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. | ||
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ABK94231.1 | 0 | 2 | 262 | 25 | 304 | unknown [Populus trichocarpa] |
| EMBL | CBI30817.1 | 0 | 93 | 233 | 31 | 164 | unnamed protein product [Vitis vinifera] |
| RefSeq | XP_002271903.1 | 0 | 1 | 233 | 20 | 259 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002331855.1 | 1.4013e-45 | 95 | 174 | 1 | 80 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002519744.1 | 0 | 1 | 262 | 16 | 282 | hydrolase, hydrolyzing O-glycosyl compounds, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 2jon_A | 3e-16 | 86 | 183 | 1 | 99 | A Chain A, Solution Structure Of The C-Terminal Domain Ole E 9 |
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
| Hit | Length | Start | End | EValue |
| EX270033 | 265 | 1 | 260 | 0 |
| GE635169 | 172 | 94 | 263 | 0 |
| EX293226 | 251 | 1 | 246 | 0 |
| JG727672 | 187 | 1 | 174 | 0 |
| CN550472 | 174 | 35 | 183 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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