| Basic Information | |
|---|---|
| Species | Manihot esculenta |
| Cazyme ID | cassava4.1_027986m |
| Family | CBM43 |
| Protein Properties | Length: 237 Molecular Weight: 26161.5 Isoelectric Point: 7.736 |
| Chromosome | Chromosome/Scaffold: 02871 Start: 540485 End: 541195 |
| Description | O-Glycosyl hydrolases family 17 protein |
| View CDS | |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| CBM43 | 113 | 194 | 5.2e-24 |
| WCIMSPDASLADPNLANSISYACSYADCTSLGYGSSCSRLDARSNASYAYNMYYQTMDQRKGSCSFNNLSVVTNQDPSQDTC | |||
| GH17 | 1 | 93 | 1.2e-32 |
| LEKNGFSSMPVIIGEVGWPTDGDPSANAENAQRFNQGLLNRIFQGQGTPKRKTPLDIYLFSLIDEDNKSIQPGNFERHWGVFYFDGALKYQLD | |||
| Full Sequence |
|---|
| Protein Sequence Length: 237 Download |
| LEKNGFSSMP VIIGEVGWPT DGDPSANAEN AQRFNQGLLN RIFQGQGTPK RKTPLDIYLF 60 SLIDEDNKSI QPGNFERHWG VFYFDGALKY QLDTGNGKSL VPAKGVKYLA RQWCIMSPDA 120 SLADPNLANS ISYACSYADC TSLGYGSSCS RLDARSNASY AYNMYYQTMD QRKGSCSFNN 180 LSVVTNQDPS QDTCRFEIMI DLRKQETAPR RSLAGKIQNS TMGLILLLLL IINGAF* 240 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| COG5309 | COG5309 | 7.0e-7 | 7 | 85 | 83 | + Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] | ||
| pfam07983 | X8 | 1.0e-13 | 112 | 181 | 77 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
| pfam00332 | Glyco_hydro_17 | 1.0e-23 | 1 | 93 | 94 | + Glycosyl hydrolases family 17. | ||
| smart00768 | X8 | 3.0e-28 | 112 | 196 | 87 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CBI27737.1 | 0 | 1 | 235 | 251 | 485 | unnamed protein product [Vitis vinifera] |
| RefSeq | XP_002277217.1 | 0 | 1 | 235 | 243 | 477 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002309443.1 | 0 | 1 | 198 | 228 | 425 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002467735.1 | 0 | 1 | 231 | 261 | 494 | hypothetical protein SORBIDRAFT_01g033200 [Sorghum bicolor] |
| RefSeq | XP_002516181.1 | 0 | 1 | 236 | 268 | 502 | Glucan endo-1,3-beta-glucosidase precursor, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3ur8_B | 0.00000000000005 | 2 | 93 | 223 | 313 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
| PDB | 3ur8_A | 0.00000000000005 | 2 | 93 | 223 | 313 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
| PDB | 3ur7_B | 0.00000000000005 | 2 | 93 | 223 | 313 | A Chain A, Higher-density Crystal Structure Of Potato Endo-1,3-beta-glucanase |
| PDB | 3ur7_A | 0.00000000000005 | 2 | 93 | 223 | 313 | A Chain A, Higher-density Crystal Structure Of Potato Endo-1,3-beta-glucanase |
| PDB | 1ghs_B | 0.00000000000009 | 1 | 92 | 217 | 304 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
| Hit | Length | Start | End | EValue |
| DT763057 | 210 | 1 | 206 | 0 |
| GO027951 | 218 | 1 | 216 | 0 |
| FS087925 | 215 | 1 | 211 | 0 |
| FG189924 | 225 | 1 | 222 | 0 |
| FG197767 | 225 | 1 | 222 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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