| Basic Information | |
|---|---|
| Species | Manihot esculenta |
| Cazyme ID | cassava4.1_027994m |
| Family | CE8 |
| Protein Properties | Length: 591 Molecular Weight: 66535.1 Isoelectric Point: 9.4974 |
| Chromosome | Chromosome/Scaffold: 03975 Start: 236009 End: 238207 |
| Description | pectin methylesterase 2 |
| View CDS | |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
 | |||
| Family | Start | End | Evalue |
| CE8 | 278 | 573 | 0 |
| NITVASDGSGDYRLIAEAIKMAPERSKNRFVIKIKAGVYNENVKITREKINIMLIGDGMTKTIIKGSKNFVDGFSTFDSATLTVAGDKFLARDLTIINTS GPQKYQAVAARVTSNSAFYRCNFSSYQDALFAHSLRQFYRECTIQGTIDFIFGNAAAIFQNCLILVRKPIPGQSNMITAQGRRDPNQNTGFSLQNCTILA APDLKSAKRQHISTFLGRPWGNHSRTVVMKSYLGDLIHPQGWYTWDNYSSLDTVEYIEHLNYGPGSNTRHRVTWKGYKKNCSEEKARQFTVGKFLH | |||
| Full Sequence |
|---|
| Protein Sequence Length: 591 Download |
| MAIIFKNSSS PSKDSTRTHQ KIAALFIFFT LTTLLLASFF RESFLDSREK QGLSDPAASA 60 TPTPIPHPII RTACSRTLYP SLCFNTLSSI PISKNFITLR YILEFTMDAA EKSAARARTH 120 VLGFFTFQDL ISQEKNALND CVEMLDQTLY ELGLAMDDLH AFPASIGHLH LLYANIKTLL 180 SAAMTNQHTC IDGFSDLDES AFENRKDLKV KLHHLFAPIT RTISNCLSII TYMEAINESR 240 IMNDHQMFVK KISPNRFPAW ISSSDRILME RRRNMKPNIT VASDGSGDYR LIAEAIKMAP 300 ERSKNRFVIK IKAGVYNENV KITREKINIM LIGDGMTKTI IKGSKNFVDG FSTFDSATLT 360 VAGDKFLARD LTIINTSGPQ KYQAVAARVT SNSAFYRCNF SSYQDALFAH SLRQFYRECT 420 IQGTIDFIFG NAAAIFQNCL ILVRKPIPGQ SNMITAQGRR DPNQNTGFSL QNCTILAAPD 480 LKSAKRQHIS TFLGRPWGNH SRTVVMKSYL GDLIHPQGWY TWDNYSSLDT VEYIEHLNYG 540 PGSNTRHRVT WKGYKKNCSE EKARQFTVGK FLHEADHWLE STGFPLFTGS * 600 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
 | ||||||||
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02314 | PLN02314 | 1.0e-146 | 74 | 585 | 530 | + pectinesterase | ||
| PLN02313 | PLN02313 | 5.0e-149 | 74 | 589 | 537 | + Pectinesterase/pectinesterase inhibitor | ||
| PLN02301 | PLN02301 | 4.0e-150 | 133 | 583 | 453 | + pectinesterase/pectinesterase inhibitor | ||
| PLN02468 | PLN02468 | 3.0e-152 | 74 | 589 | 530 | + putative pectinesterase/pectinesterase inhibitor | ||
| pfam01095 | Pectinesterase | 2.0e-169 | 278 | 572 | 296 | + Pectinesterase. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004857 | enzyme inhibitor activity |
| GO:0005618 | cell wall |
| GO:0030599 | pectinesterase activity |
| GO:0042545 | cell wall modification |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CBI27756.1 | 0 | 58 | 590 | 51 | 537 | unnamed protein product [Vitis vinifera] |
| Swiss-Prot | P83948 | 0 | 67 | 589 | 66 | 583 | PME3_CITSI RecName: Full=Pectinesterase 3; Short=PE 3; AltName: Full=Pectin methylesterase 3; Flags: Precursor |
| RefSeq | XP_002265171.1 | 0 | 67 | 589 | 94 | 610 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002277473.1 | 0 | 58 | 590 | 54 | 582 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002324773.1 | 0 | 65 | 585 | 52 | 568 | predicted protein [Populus trichocarpa] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1gq8_A | 0 | 275 | 589 | 5 | 318 | A Chain A, Pectin Methylesterase From Carrot |
| PDB | 1xg2_A | 0 | 278 | 589 | 4 | 314 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
| PDB | 2ntq_B | 3e-21 | 282 | 574 | 12 | 336 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
| PDB | 2ntq_A | 3e-21 | 282 | 574 | 12 | 336 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
| PDB | 2ntp_B | 3e-21 | 282 | 574 | 12 | 336 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| homogalacturonan degradation | RXN-2102 | EC-3.1.1.11 | pectinesterase |
