| Basic Information | |
|---|---|
| Species | Manihot esculenta |
| Cazyme ID | cassava4.1_028471m |
| Family | CBM43 |
| Protein Properties | Length: 128 Molecular Weight: 14128.2 Isoelectric Point: 8.4041 |
| Chromosome | Chromosome/Scaffold: 07571 Start: 450773 End: 451355 |
| Description | Carbohydrate-binding X8 domain superfamily protein |
| View CDS | |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| CBM43 | 45 | 122 | 8.9e-28 |
| WCIAKPSTEAGTLFRNIDFSCGQSGVDCTPIQPGGSCFNPDTPVSHASYAMNLFYKFAGKHPWDCNFNGTGVTVPQNP | |||
| Full Sequence |
|---|
| Protein Sequence Length: 128 Download |
| MDSARPPLAF LSLAFALLLS CAVCVESRYH GRNQYRMAND GRRMWCIAKP STEAGTLFRN 60 IDFSCGQSGV DCTPIQPGGS CFNPDTPVSH ASYAMNLFYK FAGKHPWDCN FNGTGVTVPQ 120 NPCKFHLK 180 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam07983 | X8 | 2.0e-17 | 45 | 116 | 77 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
| smart00768 | X8 | 1.0e-29 | 45 | 125 | 85 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. | ||
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| RefSeq | NP_001151529.1 | 3e-24 | 43 | 125 | 363 | 449 | LOC100285163 [Zea mays] |
| RefSeq | XP_002273170.1 | 5e-39 | 1 | 122 | 1 | 123 | PREDICTED: similar to At2g43670 [Vitis vinifera] |
| RefSeq | XP_002320265.1 | 1e-37 | 26 | 122 | 28 | 125 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002448791.1 | 2e-25 | 38 | 125 | 372 | 463 | hypothetical protein SORBIDRAFT_06g033250 [Sorghum bicolor] |
| RefSeq | XP_002515203.1 | 0 | 1 | 128 | 1 | 135 | hydrolase, hydrolyzing O-glycosyl compounds, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 2jon_A | 1e-21 | 45 | 122 | 13 | 89 | A Chain A, Solution Structure Of The C-Terminal Domain Ole E 9 |
