| Basic Information | |
|---|---|
| Species | Manihot esculenta |
| Cazyme ID | cassava4.1_029613m |
| Family | CE8 |
| Protein Properties | Length: 352 Molecular Weight: 39395.8 Isoelectric Point: 7.9618 |
| Chromosome | Chromosome/Scaffold: 00708 Start: 449745 End: 451179 |
| Description | Pectin lyase-like superfamily protein |
| View CDS | |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| CE8 | 58 | 343 | 0 |
| ILVDINGEGDYRSIQEAIDAVPENNSKWVIIHIRKGVYREKVHIPCNKPHIFMRGNGKGRTAIIWSMSSTDNKESATFTSESPHLVVFGISFKNEAPTGE AFTSQNQSVAAFVGADMISFYHCAFYSTHNTLFDYKGRHYYHHCYIQGSIDFIFGRARTIFHQCEIFVIIDMRVKILGSITAHNRESDNDSGFVFVEGRV YGVGHVYLGRAKGAYSRTIFAKTYLSNAIAPQGWTSWSYLGGTKNIFQAEYKCHGPGAFTFNRADWAKQLTDEEAERFMSIDFIDG | |||
| Full Sequence |
|---|
| Protein Sequence Length: 352 Download |
| MPLSSLSSSM FLKVINVALA TILATALSFS RNVQADFVKP AVIDAPLLTE KIATNNTILV 60 DINGEGDYRS IQEAIDAVPE NNSKWVIIHI RKGVYREKVH IPCNKPHIFM RGNGKGRTAI 120 IWSMSSTDNK ESATFTSESP HLVVFGISFK NEAPTGEAFT SQNQSVAAFV GADMISFYHC 180 AFYSTHNTLF DYKGRHYYHH CYIQGSIDFI FGRARTIFHQ CEIFVIIDMR VKILGSITAH 240 NRESDNDSGF VFVEGRVYGV GHVYLGRAKG AYSRTIFAKT YLSNAIAPQG WTSWSYLGGT 300 KNIFQAEYKC HGPGAFTFNR ADWAKQLTDE EAERFMSIDF IDGKEWLPAW M* 360 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02671 | PLN02671 | 1.0e-79 | 44 | 347 | 318 | + pectinesterase | ||
| PLN02432 | PLN02432 | 1.0e-86 | 58 | 347 | 291 | + putative pectinesterase | ||
| PLN02497 | PLN02497 | 1.0e-88 | 56 | 347 | 296 | + probable pectinesterase | ||
| PLN02682 | PLN02682 | 8.0e-90 | 57 | 348 | 303 | + pectinesterase family protein | ||
| PLN02480 | PLN02480 | 0 | 18 | 351 | 334 | + Probable pectinesterase | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0005618 | cell wall |
| GO:0030599 | pectinesterase activity |
| GO:0042545 | cell wall modification |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ACU23222.1 | 0 | 42 | 351 | 36 | 346 | unknown [Glycine max] |
| RefSeq | NP_188331.1 | 0 | 44 | 351 | 32 | 340 | pectinesterase family protein [Arabidopsis thaliana] |
| RefSeq | XP_002272939.1 | 0 | 8 | 351 | 2 | 348 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002311381.1 | 0 | 10 | 351 | 1 | 342 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002523016.1 | 0 | 1 | 351 | 4 | 350 | Pectinesterase-2 precursor, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1gq8_A | 6.02558e-44 | 58 | 349 | 9 | 310 | A Chain A, Pectin Methylesterase From Carrot |
| PDB | 1xg2_A | 2e-38 | 59 | 347 | 6 | 304 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
| PDB | 1qjv_B | 0.0000000000007 | 68 | 348 | 18 | 339 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
| PDB | 1qjv_A | 0.0000000000007 | 68 | 348 | 18 | 339 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
| PDB | 2ntq_B | 0.0000000000008 | 68 | 348 | 18 | 339 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| homogalacturonan degradation | RXN-2102 | EC-3.1.1.11 | pectinesterase |
