| Basic Information | |
|---|---|
| Species | Manihot esculenta |
| Cazyme ID | cassava4.1_029633m |
| Family | CE8 |
| Protein Properties | Length: 329 Molecular Weight: 36452.1 Isoelectric Point: 6.0423 |
| Chromosome | Chromosome/Scaffold: 07571 Start: 687813 End: 689150 |
| Description | Pectin lyase-like superfamily protein |
| View CDS | |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| CE8 | 36 | 327 | 0 |
| ITVDISGHGNFTSVQTAIDSVPEGNTQWIRIQISPGTYREKVAIPVNKSCIFLDGAGRKLTSIEWGDHEETDTSATFTSYSDNIVAKGIKFKNTFNLKIG FNLMKRRLIRKQAVSARIVGDKCAFYECGFIGIQDTLWDGKGRHYFNACYIEGSIDFIFGDGQSIYEKCEISITMGRYGPGLIGSITAQRKEQPQDTNGF VFKNCNISGIGKVDLGRPWGPYSTVVFYNSSISNVITPEGWNAWDYVGHEANFTYVEKDNEGAGANTSKRVPWINKLGENEVYKFLDISYIN | |||
| Full Sequence |
|---|
| Protein Sequence Length: 329 Download |
| MKNLCLILIG GVVLLLHCSS SDCEASDCQP NTINTITVDI SGHGNFTSVQ TAIDSVPEGN 60 TQWIRIQISP GTYREKVAIP VNKSCIFLDG AGRKLTSIEW GDHEETDTSA TFTSYSDNIV 120 AKGIKFKNTF NLKIGFNLMK RRLIRKQAVS ARIVGDKCAF YECGFIGIQD TLWDGKGRHY 180 FNACYIEGSI DFIFGDGQSI YEKCEISITM GRYGPGLIGS ITAQRKEQPQ DTNGFVFKNC 240 NISGIGKVDL GRPWGPYSTV VFYNSSISNV ITPEGWNAWD YVGHEANFTY VEKDNEGAGA 300 NTSKRVPWIN KLGENEVYKF LDISYINGD 360 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02432 | PLN02432 | 4.0e-81 | 36 | 328 | 294 | + putative pectinesterase | ||
| PLN02682 | PLN02682 | 6.0e-84 | 35 | 329 | 306 | + pectinesterase family protein | ||
| PLN02480 | PLN02480 | 6.0e-91 | 31 | 328 | 299 | + Probable pectinesterase | ||
| PLN02176 | PLN02176 | 5.0e-107 | 35 | 329 | 296 | + putative pectinesterase | ||
| PLN02497 | PLN02497 | 8.0e-133 | 34 | 327 | 294 | + probable pectinesterase | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0005618 | cell wall |
| GO:0030599 | pectinesterase activity |
| GO:0042545 | cell wall modification |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CBI40838.1 | 0 | 12 | 329 | 22 | 334 | unnamed protein product [Vitis vinifera] |
| RefSeq | XP_002263748.1 | 0 | 34 | 329 | 30 | 321 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002515255.1 | 0 | 1 | 329 | 1 | 328 | Pectinesterase-2 precursor, putative [Ricinus communis] |
| RefSeq | XP_002515259.1 | 0 | 16 | 329 | 341 | 653 | pectinesterase, putative [Ricinus communis] |
| RefSeq | XP_002515259.1 | 0 | 25 | 328 | 24 | 331 | pectinesterase, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1gq8_A | 1.00053e-42 | 24 | 308 | 1 | 281 | A Chain A, Pectin Methylesterase From Carrot |
| PDB | 1xg2_A | 4e-31 | 33 | 308 | 2 | 277 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
| PDB | 2ntq_B | 1e-18 | 32 | 304 | 3 | 315 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
| PDB | 2ntq_A | 1e-18 | 32 | 304 | 3 | 315 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
| PDB | 2ntp_B | 1e-18 | 32 | 304 | 3 | 315 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| homogalacturonan degradation | RXN-2102 | EC-3.1.1.11 | pectinesterase |
