| Basic Information | |
|---|---|
| Species | Manihot esculenta |
| Cazyme ID | cassava4.1_029736m |
| Family | GH35 |
| Protein Properties | Length: 716 Molecular Weight: 78328.3 Isoelectric Point: 8.8292 |
| Chromosome | Chromosome/Scaffold: 10493 Start: 311429 End: 315329 |
| Description | beta-galactosidase 15 |
| View CDS | |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GH35 | 1 | 253 | 0 |
| MWPDLIEKAKDGGLDVIETYVFWNLHEPRRKQYDFSGNLDVVKFFNLVQEGEAGMYGFLRIGPYACAEWNCGGFPVWLHNMKGIALRTDNLVYKMQTFTA KIVNLCKAANLFASQGGPIIFAQVSTQMAESLNVGIPWVMCQQNNAPKPIINTCNGYYCDQFTPNNPSSPKMWTENWIGWFKSWGAQDPRRTAEDAAFAV ARFFQYNGYHGGTNFGRTSGGPYITTSYDYDAPLDEYGNLNQPKWGHLKQLHA | |||
| Full Sequence |
|---|
| Protein Sequence Length: 716 Download |
| MWPDLIEKAK DGGLDVIETY VFWNLHEPRR KQYDFSGNLD VVKFFNLVQE GEAGMYGFLR 60 IGPYACAEWN CGGFPVWLHN MKGIALRTDN LVYKMQTFTA KIVNLCKAAN LFASQGGPII 120 FAQVSTQMAE SLNVGIPWVM CQQNNAPKPI INTCNGYYCD QFTPNNPSSP KMWTENWIGW 180 FKSWGAQDPR RTAEDAAFAV ARFFQYNGYH GGTNFGRTSG GPYITTSYDY DAPLDEYGNL 240 NQPKWGHLKQ LHAAIKSGEK ILTSGNSSVT QFPNNVNIFN TAKVNTQTSL MIKKPSSGNG 300 TKNPLSWSWA AEPMDDTLKG KGTFKTTRLL EQKETTFDAS DYLWYMTTVN LNGTSWNNAN 360 LSVNTSGHVL HAFVNGKLIG SKWGTGGHYN FLFNKAATFN SGSNIISLLS ATVGLKNYGS 420 FFDLQPTGIN GPVKLLGSGS DVMNLSSNSW SYKVKILGKL EKFWKHCFSI AYKLKITSCP 480 FDFISGRRVG LNSEAHKFHH GDVSATKWPS NNLPSGQPFT WYKTSFQTPP GTDPVVVDLQ 540 GMAWVNGNSL GRFWPSYLAA NAKCSDTCDY RGAYAAKKCV QNCGNPTQRW YHIPRSLLNK 600 NNTLVLFEEF GGNPSQVGIQ TVTVGTACGN AYDGNSLELS CQGGQKISAI QFASFGNPTG 660 SCGSYQKGPC DSADSLSAAQ KACVGKMSCS LNVSQGSFGS SSCGSTNRLA VQATC* 720 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam02140 | Gal_Lectin | 4.0e-9 | 639 | 715 | 80 | + Galactose binding lectin domain. | ||
| COG1874 | LacA | 1.0e-10 | 1 | 79 | 81 | + Beta-galactosidase [Carbohydrate transport and metabolism] | ||
| pfam01301 | Glyco_hydro_35 | 2.0e-115 | 1 | 255 | 299 | + Glycosyl hydrolases family 35. | ||
| PLN03059 | PLN03059 | 0 | 1 | 689 | 796 | + beta-galactosidase; Provisional | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005529 | Interacting selectively and non-covalently with any carbohydrate, which includes monosaccharides, oligosaccharides and polysaccharides as well as substances derived from monosaccharides by reduction of the carbonyl group (alditols), by oxidation of one or more hydroxy groups to afford the corresponding aldehydes, ketones, or carboxylic acids, or by replacement of one or more hydroxy group(s) by a hydrogen atom. Cyclitols are generally not regarded as carbohydrates." [CHEBI:16646, GOC:mah] |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CBI27773.1 | 0 | 1 | 715 | 70 | 835 | unnamed protein product [Vitis vinifera] |
| RefSeq | XP_002276918.1 | 0 | 1 | 715 | 1 | 766 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002324727.1 | 0 | 1 | 682 | 1 | 745 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002326135.1 | 0 | 1 | 715 | 60 | 823 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002516237.1 | 0 | 1 | 715 | 55 | 825 | beta-galactosidase, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3d3a_A | 3e-35 | 2 | 251 | 39 | 325 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
| PDB | 3thd_D | 4e-27 | 2 | 261 | 42 | 337 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
| PDB | 3thd_C | 4e-27 | 2 | 261 | 42 | 337 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
| PDB | 3thd_B | 4e-27 | 2 | 261 | 42 | 337 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
| PDB | 3thd_A | 4e-27 | 2 | 261 | 42 | 337 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| lactose degradation III | BETAGALACTOSID-RXN | EC-3.2.1.23 | β-galactosidase |
| Hydropathy |
|---|
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
| Hit | Length | Start | End | EValue |
| HO778160 | 719 | 1 | 626 | 0 |
| HO780602 | 659 | 21 | 585 | 0 |
| DW076707 | 282 | 1 | 252 | 0 |
| HO795552 | 568 | 63 | 540 | 0 |
| HO780602 | 35 | 578 | 611 | 0.001 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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| Phylogeny |
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