| Basic Information | |
|---|---|
| Species | Manihot esculenta |
| Cazyme ID | cassava4.1_029937m |
| Family | GH10 |
| Protein Properties | Length: 546 Molecular Weight: 60935.9 Isoelectric Point: 9.2101 |
| Chromosome | Chromosome/Scaffold: 00396 Start: 93064 End: 95419 |
| Description | Glycosyl hydrolase family 10 protein |
| View CDS | |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GH10 | 213 | 479 | 0 |
| QKRASFPFGCAINKNILSNNAYQNWFNSRFTVTVFEDEMKWYSTEPSQGKVDYSVPDAMLQFAKKNNIQVRGHNVFWEDPKFQPWWVKSLSPTDLSKAAT NRINSIMSRYKGQVIGWDVVNENLHHDFFESKLGNTASAVFYNLAQKIDGGSTLFLNEYNTIEDGRDGKSTPAKYLQKLRDIKAFPGNQNLKLGIGLESH FSRSAPNLAYIRASIDTLGATNLPIWLTELDVQSNPNQANYLEQILREAHSHPKVAGIVIWAAWKPQ | |||
| Full Sequence |
|---|
| Protein Sequence Length: 546 Download |
| MLSSILITGF TIANALPYDY TASIECLASP HKPQYHGGII QNPELNEGLK GWVAFGDAKI 60 EHRKMGNNRF IVAKSRVHPH DSVSQNLYLQ KNKIYTFSAW IQVSKGKVPV SAFLKTQTGS 120 KYAGAVFAES NCWSMLKGGL TVDASGPVQL YFGSNDTSAD IWVDSISLQP FTQKQWMSHQ 180 DQALEKTRRT KVRIQAVDSE GKPLSNATII VEQKRASFPF GCAINKNILS NNAYQNWFNS 240 RFTVTVFEDE MKWYSTEPSQ GKVDYSVPDA MLQFAKKNNI QVRGHNVFWE DPKFQPWWVK 300 SLSPTDLSKA ATNRINSIMS RYKGQVIGWD VVNENLHHDF FESKLGNTAS AVFYNLAQKI 360 DGGSTLFLNE YNTIEDGRDG KSTPAKYLQK LRDIKAFPGN QNLKLGIGLE SHFSRSAPNL 420 AYIRASIDTL GATNLPIWLT ELDVQSNPNQ ANYLEQILRE AHSHPKVAGI VIWAAWKPQG 480 CYAMCLTDNN FKNLPTGDVV DKLLAGRFAT KSVVGRTDGN GFFEASLIHG DYSVKIHHSS 540 AENSSL 600 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam02018 | CBM_4_9 | 1.0e-5 | 46 | 158 | 123 | + Carbohydrate binding domain. This family includes diverse carbohydrate binding domains. | ||
| COG3693 | XynA | 9.0e-32 | 213 | 444 | 243 | + Beta-1,4-xylanase [Carbohydrate transport and metabolism] | ||
| pfam00331 | Glyco_hydro_10 | 4.0e-55 | 216 | 492 | 300 | + Glycosyl hydrolase family 10. | ||
| smart00633 | Glyco_10 | 1.0e-79 | 251 | 500 | 272 | + Glycosyl hydrolase family 10. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| GO:0016798 | hydrolase activity, acting on glycosyl bonds |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAN10199.1 | 0 | 4 | 537 | 19 | 549 | endoxylanase [Carica papaya] |
| RefSeq | XP_002264556.1 | 0 | 7 | 546 | 100 | 634 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002264605.1 | 0 | 14 | 546 | 23 | 550 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002313180.1 | 0 | 24 | 545 | 1 | 520 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002532418.1 | 0 | 13 | 546 | 18 | 548 | Endo-1,4-beta-xylanase C precursor, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1nq6_A | 2e-32 | 220 | 500 | 15 | 298 | A Chain A, Crystal Structure Of The Catalytic Domain Of Xylanase A From Streptomyces Halstedii Jm8 |
| PDB | 1e0v_A | 2e-29 | 220 | 473 | 16 | 266 | A Chain A, Xylanase 10a From Sreptomyces Lividans. Cellobiosyl-Enzyme Intermediate At 1.7 A |
| PDB | 1v0n_A | 2e-29 | 220 | 473 | 16 | 266 | A Chain A, Xylanase 10a From Sreptomyces Lividans. Cellobiosyl-Enzyme Intermediate At 1.7 A |
| PDB | 1v0m_A | 2e-29 | 220 | 473 | 16 | 266 | A Chain A, Xylanase 10a From Sreptomyces Lividans. Cellobiosyl-Enzyme Intermediate At 1.7 A |
| PDB | 1v0l_A | 2e-29 | 220 | 473 | 16 | 266 | A Chain A, Xylanase 10a From Sreptomyces Lividans. Cellobiosyl-Enzyme Intermediate At 1.7 A |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| (1,4)-β-xylan degradation | 3.2.1.8-RXN | EC-3.2.1.8 | endo-1,4-β-xylanase |
