| Basic Information | |
|---|---|
| Species | Manihot esculenta |
| Cazyme ID | cassava4.1_030302m |
| Family | CBM43 |
| Protein Properties | Length: 457 Molecular Weight: 50736.4 Isoelectric Point: 10.5422 |
| Chromosome | Chromosome/Scaffold: 06705 Start: 210397 End: 212235 |
| Description | O-Glycosyl hydrolases family 17 protein |
| View CDS | |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| CBM43 | 372 | 454 | 9.5e-30 |
| WCVPKSGASAQALQANIDYACSQGVDCRPIQTGGLCFDPNNVWSHASFVMNSFYRTHGARDFACDFSKTGLLTPFDPSRGTCK | |||
| GH17 | 25 | 338 | 0 |
| IGVNYGTLGNDLPPPSQVANFLKTQTIIDSIKIFDSNPDIIRAFANTGITVTISAGNGEIPALANLNNARKWVAVNVSPFHPRTKIKRICVGNEIMASAN KAWISNLVPAMWSVHNALLLAGIKDIQVTTPHSLGILSISEPPSAAKFRRGYDRVIFVPMLRFLRQTRSPFMVNPYPYFGYSPQMANYALFKRNQGVRDR FTGITYRNMYDAMLDAVHSAMKKLGYGDVDIVVGETGWPSVCDPGQPACSFQNAAWFNGNLVRRERQRRGTPLMPNRRFETYIFALFNENLKPGPTAEKN FGLFRPDFRPVYDI | |||
| Full Sequence |
|---|
| Protein Sequence Length: 457 Download |
| MITRAHHLFL LISTILRLSA STFAIGVNYG TLGNDLPPPS QVANFLKTQT IIDSIKIFDS 60 NPDIIRAFAN TGITVTISAG NGEIPALANL NNARKWVAVN VSPFHPRTKI KRICVGNEIM 120 ASANKAWISN LVPAMWSVHN ALLLAGIKDI QVTTPHSLGI LSISEPPSAA KFRRGYDRVI 180 FVPMLRFLRQ TRSPFMVNPY PYFGYSPQMA NYALFKRNQG VRDRFTGITY RNMYDAMLDA 240 VHSAMKKLGY GDVDIVVGET GWPSVCDPGQ PACSFQNAAW FNGNLVRRER QRRGTPLMPN 300 RRFETYIFAL FNENLKPGPT AEKNFGLFRP DFRPVYDIGI MRNRQLPASG RRRSVRPRVG 360 GSVAPKPTGK RWCVPKSGAS AQALQANIDY ACSQGVDCRP IQTGGLCFDP NNVWSHASFV 420 MNSFYRTHGA RDFACDFSKT GLLTPFDPSR GTCKYI* 480 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam07983 | X8 | 5.0e-21 | 371 | 441 | 76 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
| smart00768 | X8 | 9.0e-38 | 372 | 455 | 84 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. | ||
| pfam00332 | Glyco_hydro_17 | 7.0e-97 | 25 | 338 | 320 | + Glycosyl hydrolases family 17. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ABK95730.1 | 0 | 9 | 455 | 13 | 447 | unknown [Populus trichocarpa] |
| RefSeq | XP_002283647.1 | 0 | 16 | 456 | 19 | 446 | PREDICTED: hypothetical protein isoform 1 [Vitis vinifera] |
| RefSeq | XP_002312097.1 | 0 | 9 | 455 | 13 | 447 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002312098.1 | 0 | 21 | 456 | 26 | 454 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002530863.1 | 0 | 1 | 456 | 1 | 457 | Glucan endo-1,3-beta-glucosidase precursor, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3f55_D | 0 | 25 | 338 | 2 | 313 | A Chain A, Structure Of Ugt78g1 Complexed With Myricetin And Udp |
| PDB | 3f55_C | 0 | 25 | 338 | 2 | 313 | A Chain A, Structure Of Ugt78g1 Complexed With Myricetin And Udp |
| PDB | 3f55_B | 0 | 25 | 338 | 2 | 313 | A Chain A, Structure Of Ugt78g1 Complexed With Myricetin And Udp |
| PDB | 3f55_A | 0 | 25 | 338 | 2 | 313 | A Chain A, Structure Of Ugt78g1 Complexed With Myricetin And Udp |
| PDB | 3em5_D | 0 | 25 | 338 | 2 | 313 | A Chain A, Crystal Structure Of A Native Endo Beta-1,3-Glucanase (Hev B 2), A Major Allergen From Hevea Brasiliensis |
