| Basic Information | |
|---|---|
| Species | Manihot esculenta |
| Cazyme ID | cassava4.1_030523m |
| Family | CBM43 |
| Protein Properties | Length: 501 Molecular Weight: 54843.7 Isoelectric Point: 6.7334 |
| Chromosome | Chromosome/Scaffold: 06598 Start: 179823 End: 182276 |
| Description | O-Glycosyl hydrolases family 17 protein |
| View CDS | |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| CBM43 | 360 | 441 | 1.7e-33 |
| CIAMDGVDSRTLQAALDWACGPGRANCSEIQPGEGCYQPNSVKYHASYAFDSYYQKEGKAPGSCDFKGVAMITTTDPSHGSC | |||
| GH17 | 24 | 341 | 0 |
| FSLGTDVSNVLSPKDLVSFLQTQKITHVRLYDADPDTLKALAKTKIRVIISVPNNQILAIGSSNATAASWIGRNVVAYYPETLITAIAVGDELLTTIPSS APLLMPAIESLYSALVAANLHTQIKISTPHAASIMLDPFPPSQSFFNQSWNSVMLPLLQFLSKTGSPLMMNLYPYYVFMQNKGVVPLDNSLFKPLTPSKE MVDPNTLLHYTNVLDAMIDAAYFSMKNLNITDVVVLVTETGWPSRGDSKEPYATIDNADTYNSNLIKHVLDRSGTPFHPEVTSSVYIYELFNEDLRSPPV SEANWGLFYGNSTPVYLL | |||
| Full Sequence |
|---|
| Protein Sequence Length: 501 Download |
| MANSKFSLLI IAIIFVFSTG IFRFSLGTDV SNVLSPKDLV SFLQTQKITH VRLYDADPDT 60 LKALAKTKIR VIISVPNNQI LAIGSSNATA ASWIGRNVVA YYPETLITAI AVGDELLTTI 120 PSSAPLLMPA IESLYSALVA ANLHTQIKIS TPHAASIMLD PFPPSQSFFN QSWNSVMLPL 180 LQFLSKTGSP LMMNLYPYYV FMQNKGVVPL DNSLFKPLTP SKEMVDPNTL LHYTNVLDAM 240 IDAAYFSMKN LNITDVVVLV TETGWPSRGD SKEPYATIDN ADTYNSNLIK HVLDRSGTPF 300 HPEVTSSVYI YELFNEDLRS PPVSEANWGL FYGNSTPVYL LHVYGSGTFL ANDTTNQTYC 360 IAMDGVDSRT LQAALDWACG PGRANCSEIQ PGEGCYQPNS VKYHASYAFD SYYQKEGKAP 420 GSCDFKGVAM ITTTDPSHGS CIFPGSKKVS NKTRTVANLT QESSATHSLR FINFKSSRID 480 KGLSSFLAVV FSILLHIPFV * 540 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| COG5309 | COG5309 | 1.0e-5 | 254 | 334 | 84 | + Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] | ||
| pfam07983 | X8 | 3.0e-23 | 358 | 430 | 78 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
| smart00768 | X8 | 1.0e-41 | 358 | 443 | 86 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. | ||
| pfam00332 | Glyco_hydro_17 | 4.0e-82 | 24 | 339 | 316 | + Glycosyl hydrolases family 17. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAC17632.1 | 0 | 24 | 437 | 46 | 459 | Similar to glucan endo-1,3-beta-D-glucosidase precursor gb |
| EMBL | CBI23232.1 | 0 | 1 | 481 | 11 | 505 | unnamed protein product [Vitis vinifera] |
| RefSeq | XP_002316541.1 | 0 | 34 | 500 | 1 | 470 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002332610.1 | 0 | 34 | 500 | 1 | 470 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002518468.1 | 0 | 1 | 500 | 1 | 531 | Glucan endo-1,3-beta-glucosidase precursor, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 2cyg_A | 0 | 31 | 341 | 10 | 310 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
| PDB | 3ur8_B | 0 | 27 | 342 | 8 | 313 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
| PDB | 3ur8_A | 0 | 27 | 342 | 8 | 313 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
| PDB | 3ur7_B | 0 | 27 | 342 | 8 | 313 | A Chain A, Higher-density Crystal Structure Of Potato Endo-1,3-beta-glucanase |
| PDB | 3ur7_A | 0 | 27 | 342 | 8 | 313 | A Chain A, Higher-density Crystal Structure Of Potato Endo-1,3-beta-glucanase |
