| Basic Information | |
|---|---|
| Species | Manihot esculenta |
| Cazyme ID | cassava4.1_030559m |
| Family | CBM43 |
| Protein Properties | Length: 177 Molecular Weight: 19088 Isoelectric Point: 5.6642 |
| Chromosome | Chromosome/Scaffold: 03604 Start: 205589 End: 207545 |
| Description | Carbohydrate-binding X8 domain superfamily protein |
| View CDS | |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| CBM43 | 54 | 137 | 8.2e-35 |
| WCVALAGVSQIDLQNALDWACGLGMADCSPIQQGGSCFEPDTLLSHASFAFNNYYQQNGNSDIACNFGGTATLTKSNPSYGKCN | |||
| Full Sequence |
|---|
| Protein Sequence Length: 177 Download |
| MRKKMWALRC LLFLECFLVM AVEANVQEKA EATIPVTTLS PPEGNTTFLG GTTWCVALAG 60 VSQIDLQNAL DWACGLGMAD CSPIQQGGSC FEPDTLLSHA SFAFNNYYQQ NGNSDIACNF 120 GGTATLTKSN PSYGKCNYAA PGLGSLHSSA PPFSDCMPKI VWWKFLVILL LLYLRS* 180 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam07983 | X8 | 8.0e-23 | 53 | 125 | 82 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
| smart00768 | X8 | 2.0e-41 | 53 | 138 | 86 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. | ||
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ACJ85566.1 | 0 | 1 | 173 | 1 | 175 | unknown [Medicago truncatula] |
| GenBank | ACU17215.1 | 0 | 1 | 151 | 1 | 149 | unknown [Glycine max] |
| EMBL | CBI30973.1 | 0 | 1 | 163 | 549 | 709 | unnamed protein product [Vitis vinifera] |
| RefSeq | XP_002332014.1 | 0 | 22 | 139 | 1 | 118 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002526606.1 | 0 | 26 | 133 | 6 | 113 | hydrolase, hydrolyzing O-glycosyl compounds, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 2jon_A | 3e-23 | 53 | 138 | 12 | 96 | A Chain A, Solution Structure Of The C-Terminal Domain Ole E 9 |
