| Basic Information | |
|---|---|
| Species | Manihot esculenta |
| Cazyme ID | cassava4.1_030595m |
| Family | CE8 |
| Protein Properties | Length: 367 Molecular Weight: 40036.9 Isoelectric Point: 9.4732 |
| Chromosome | Chromosome/Scaffold: 11714 Start: 6313 End: 7685 |
| Description | Pectin lyase-like superfamily protein |
| View CDS | |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| CE8 | 71 | 356 | 0 |
| ITLSKDGRGDFKTLTDAIKSIPADNKQRVIIKIGPGVYTEKIQIERNKPFITLLGDPKAMPTLAFGGTAHEYGTLYSATIAIESEYFMAVNIIFKNTAPG PITKNPGAQAVALRVSGDKAAFYNCKMLGFQDTLCDDNGRHFFKNCYIEGTVDFIFGKGRSLYLESQLNVIDNKGVTFITAHSKEKKSDVVGYSFVQCKI TGSASGAYLGRAWRQMPEVVFSYTEMGRVVNPLGWSNNNKPERESTVFFGEYKNSGPGSNPKNRVKFAKQLTDGEAKNFLTLGYIQ | |||
| Full Sequence |
|---|
| Protein Sequence Length: 367 Download |
| MAKGHCIAAT HCVLIAILVV ATTVSSDDTT PIPADDSKVS NWFQTMVKPL VSRKGTLDPA 60 LEAAEAKSRT ITLSKDGRGD FKTLTDAIKS IPADNKQRVI IKIGPGVYTE KIQIERNKPF 120 ITLLGDPKAM PTLAFGGTAH EYGTLYSATI AIESEYFMAV NIIFKNTAPG PITKNPGAQA 180 VALRVSGDKA AFYNCKMLGF QDTLCDDNGR HFFKNCYIEG TVDFIFGKGR SLYLESQLNV 240 IDNKGVTFIT AHSKEKKSDV VGYSFVQCKI TGSASGAYLG RAWRQMPEVV FSYTEMGRVV 300 NPLGWSNNNK PERESTVFFG EYKNSGPGSN PKNRVKFAKQ LTDGEAKNFL TLGYIQGSKW 360 LLPPPM* 420 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02773 | PLN02773 | 4.0e-87 | 68 | 362 | 311 | + pectinesterase | ||
| PLN02671 | PLN02671 | 4.0e-88 | 68 | 361 | 309 | + pectinesterase | ||
| PLN02432 | PLN02432 | 2.0e-88 | 71 | 361 | 293 | + putative pectinesterase | ||
| PLN02682 | PLN02682 | 1.0e-114 | 50 | 363 | 327 | + pectinesterase family protein | ||
| PLN02665 | PLN02665 | 0 | 7 | 365 | 360 | + pectinesterase family protein | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0005618 | cell wall |
| GO:0030599 | pectinesterase activity |
| GO:0042545 | cell wall modification |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| RefSeq | XP_002309337.1 | 0 | 11 | 365 | 12 | 367 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002318197.1 | 0 | 7 | 365 | 4 | 363 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002333446.1 | 0 | 4 | 365 | 2 | 364 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002511043.1 | 0 | 1 | 365 | 1 | 364 | Pectinesterase-1 precursor, putative [Ricinus communis] |
| RefSeq | XP_002511045.1 | 0 | 7 | 365 | 8 | 365 | Pectinesterase-1 precursor, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1gq8_A | 8.40779e-45 | 71 | 361 | 9 | 308 | A Chain A, Pectin Methylesterase From Carrot |
| PDB | 1xg2_A | 4.00001e-41 | 73 | 361 | 7 | 304 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
| PDB | 2ntq_B | 4e-23 | 74 | 349 | 12 | 328 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
| PDB | 2ntq_A | 4e-23 | 74 | 349 | 12 | 328 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
| PDB | 2ntp_B | 4e-23 | 74 | 349 | 12 | 328 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| homogalacturonan degradation | RXN-2102 | EC-3.1.1.11 | pectinesterase |
