Basic Information | |
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Species | Manihot esculenta |
Cazyme ID | cassava4.1_030609m |
Family | CE8 |
Protein Properties | Length: 225 Molecular Weight: 24636 Isoelectric Point: 6.4961 |
Chromosome | Chromosome/Scaffold: 09570 Start: 49462 End: 51790 |
Description | Pectin lyase-like superfamily protein |
View CDS |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CE8 | 61 | 213 | 0 |
ITVARHSFADFQTITGAIHSITVDNKQRIIIWINGGEYWEKITINSSKPFITFYGDPGDMPKIVFNGTAAQYGTVYSAIVAVESDYFMAANVAFVNRSTG SSMRISGDKAAFHNCQLVGFQDTLCDDRGRHLFKDCYFCGTVDFIFGNGKSLY |
Full Sequence |
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Protein Sequence Length: 225 Download |
LLPLQLLPTA VSNSKQVPSD FTKLSSWVAD NIKDYNQRKA DASKGIPPIC LATAEDSVTV 60 ITVARHSFAD FQTITGAIHS ITVDNKQRII IWINGGEYWE KITINSSKPF ITFYGDPGDM 120 PKIVFNGTAA QYGTVYSAIV AVESDYFMAA NVAFVNRSTG SSMRISGDKA AFHNCQLVGF 180 QDTLCDDRGR HLFKDCYFCG TVDFIFGNGK SLYPVIFLQD SPCT* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02671 | PLN02671 | 2.0e-36 | 60 | 213 | 174 | + pectinesterase | ||
PLN02634 | PLN02634 | 2.0e-39 | 58 | 213 | 173 | + probable pectinesterase | ||
PLN02682 | PLN02682 | 3.0e-42 | 60 | 213 | 172 | + pectinesterase family protein | ||
PLN02304 | PLN02304 | 8.0e-43 | 41 | 213 | 184 | + probable pectinesterase | ||
PLN02665 | PLN02665 | 2.0e-112 | 1 | 213 | 223 | + pectinesterase family protein |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CBI27759.1 | 0 | 6 | 219 | 37 | 264 | unnamed protein product [Vitis vinifera] |
EMBL | CBI38547.1 | 0 | 1 | 213 | 13 | 231 | unnamed protein product [Vitis vinifera] |
RefSeq | XP_002277518.1 | 0 | 6 | 219 | 25 | 252 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002326144.1 | 0 | 1 | 213 | 15 | 241 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002516214.1 | 0 | 1 | 213 | 17 | 245 | Pectinesterase-3 precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1gq8_A | 9e-19 | 61 | 220 | 9 | 169 | A Chain A, Pectin Methylesterase From Carrot |
PDB | 1xg2_A | 0.0000000000003 | 63 | 213 | 7 | 163 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 1qjv_B | 0.00000000005 | 71 | 213 | 18 | 185 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
PDB | 1qjv_A | 0.00000000005 | 71 | 213 | 18 | 185 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
PDB | 2ntq_B | 0.00000000005 | 71 | 213 | 18 | 185 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
Metabolic Pathways | |||
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Pathway Name | Reaction | EC | Protein Name |
homogalacturonan degradation | RXN-2102 | EC-3.1.1.11 | pectinesterase |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
BI935374 | 224 | 1 | 213 | 0 |
GO504417 | 207 | 17 | 213 | 0 |
FC884230 | 215 | 17 | 221 | 0 |
DY304101 | 219 | 17 | 225 | 0 |
FC896493 | 207 | 17 | 213 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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