y
Basic Information | |
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Species | Manihot esculenta |
Cazyme ID | cassava4.1_030890m |
Family | CE8 |
Protein Properties | Length: 337 Molecular Weight: 36246.8 Isoelectric Point: 8.1053 |
Chromosome | Chromosome/Scaffold: 03081 Start: 164345 End: 165812 |
Description | pectinesterase 11 |
View CDS |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CE8 | 37 | 309 | 0 |
RVDQSGKGDFKKIQDAIDSVPPNNSQLVFISVKPGVYREKVVVPADKPFITLSGTKASNTIITWSDGGNIFESPTFSVLASDFVGRFLTIQNTYGSGDKA VALRVSGDRAAFYGCRILSYQDTLLDDTGSHYYSNCYIEGATDFICGSAASIFESCHVHSISKNNGSITAQHRDSPTQNSGFTFLGCKITGTGSAYLGRP WGDYSTVVFALSYMSSAIVPAGWDSWASQTKQSTVFYAEYKCYGPGANRVQRVEWSQSLSKEEAAPFLTKAMI |
Full Sequence |
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Protein Sequence Length: 337 Download |
MEISGYIIAM TLAHTALFGS LMAAAASIDL STAVLIRVDQ SGKGDFKKIQ DAIDSVPPNN 60 SQLVFISVKP GVYREKVVVP ADKPFITLSG TKASNTIITW SDGGNIFESP TFSVLASDFV 120 GRFLTIQNTY GSGDKAVALR VSGDRAAFYG CRILSYQDTL LDDTGSHYYS NCYIEGATDF 180 ICGSAASIFE SCHVHSISKN NGSITAQHRD SPTQNSGFTF LGCKITGTGS AYLGRPWGDY 240 STVVFALSYM SSAIVPAGWD SWASQTKQST VFYAEYKCYG PGANRVQRVE WSQSLSKEEA 300 APFLTKAMIG GQSWLRGAPT YFRRSSTIVK SHSGNN* 360 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02497 | PLN02497 | 1.0e-93 | 36 | 319 | 297 | + probable pectinesterase | ||
PLN02665 | PLN02665 | 5.0e-99 | 21 | 321 | 314 | + pectinesterase family protein | ||
PLN02671 | PLN02671 | 9.0e-101 | 29 | 316 | 305 | + pectinesterase | ||
PLN02682 | PLN02682 | 1.0e-115 | 36 | 316 | 298 | + pectinesterase family protein | ||
PLN02432 | PLN02432 | 0 | 24 | 316 | 293 | + putative pectinesterase |
Gene Ontology | |
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GO Term | Description |
GO:0005618 | cell wall |
GO:0030599 | pectinesterase activity |
GO:0042545 | cell wall modification |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CAN79458.1 | 0 | 18 | 329 | 26 | 339 | hypothetical protein [Vitis vinifera] |
EMBL | CBI37658.1 | 0 | 18 | 329 | 44 | 357 | unnamed protein product [Vitis vinifera] |
RefSeq | XP_002280496.1 | 0 | 30 | 329 | 1 | 300 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002305435.1 | 0 | 12 | 323 | 2 | 315 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002512914.1 | 0 | 29 | 336 | 37 | 346 | Pectinesterase-3 precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1gq8_A | 0 | 36 | 316 | 9 | 309 | A Chain A, Pectin Methylesterase From Carrot |
PDB | 1xg2_A | 0 | 38 | 316 | 7 | 305 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 3uw0_A | 5e-17 | 1 | 309 | 6 | 357 | A Chain A, Pectin Methylesterase From Yersinia Enterocolitica |
PDB | 2ntq_B | 0.000000000000001 | 33 | 310 | 6 | 335 | A Chain A, Pectin Methylesterase From Yersinia Enterocolitica |
PDB | 2ntq_A | 0.000000000000001 | 33 | 310 | 6 | 335 | A Chain A, Pectin Methylesterase From Yersinia Enterocolitica |
Metabolic Pathways | |||
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Pathway Name | Reaction | EC | Protein Name |
homogalacturonan degradation | RXN-2102 | EC-3.1.1.11 | pectinesterase |