| Basic Information | |
|---|---|
| Species | Manihot esculenta |
| Cazyme ID | cassava4.1_031190m |
| Family | CBM57 |
| Protein Properties | Length: 598 Molecular Weight: 65509.9 Isoelectric Point: 5.189 |
| Chromosome | Chromosome/Scaffold: 08359 Start: 472433 End: 480962 |
| Description | Di-glucose binding protein with Leucine-rich repeat domain |
| View CDS | |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
 | |||
| Family | Start | End | Evalue |
| CBM57 | 186 | 331 | 6.5e-24 |
| NDTDKFGRSWQSDSEFRSPTASSKFNSFSTLEKITGTDQAPNYFPMKLYQTAVTGNGILEYELAVDAKLDYLLWFHFAEIDSTINKKGKRVFDVLVNDEN VSRVDIYAQVGSFAAYSLQYTVHNLSNTPLTVKLVPLVGAPLISGI | |||
| Full Sequence |
|---|
| Protein Sequence Length: 598 Download |
| TSYFIDCGGS TNSTDPFNTT WLSDRFFTGG LTSVVSEPLH FHFPQEKTLR FFPLSSGKKN 60 CYILPLPNGR YYIRTFTVYD NYDGKSHSPS FDVSVEGTLV FSWRSPWPES LARDGAYSDL 120 FAFVKDREAD ICFYSIATDP PAIGTLEIRQ VDPLSYESSK IGDNFILVNY GRLSCGSDQW 180 GPGFSNDTDK FGRSWQSDSE FRSPTASSKF NSFSTLEKIT GTDQAPNYFP MKLYQTAVTG 240 NGILEYELAV DAKLDYLLWF HFAEIDSTIN KKGKRVFDVL VNDENVSRVD IYAQVGSFAA 300 YSLQYTVHNL SNTPLTVKLV PLVGAPLISG IENYALVPND ISTAPEQVVA MRALKESLLV 360 PDRMGWNGDP CAPTNWDAWE GVTCHSSKDG TALVISQIDL GSQGLKGYIS DQISLLSNLV 420 SLNLSSNSLV GTLPSGLGHK SLVSLDLSNN QFSGPIPESL ASSSLQLVLL NNNLLEGPVQ 480 EGLYSIGVHG GTIDLSGNKA LCGGPSLPQC SLFWENGHLS TGGKVGIALS CLVVVSLLLL 540 VVYIYIKRSR NDYDFAPPHD LMSMAAKRNR YQRQKSLMLL EMESQHAKGL SSPYGPQ* 600 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
 | ||||||||
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN00113 | PLN00113 | 0.0003 | 374 | 457 | 92 | + leucine-rich repeat receptor-like protein kinase; Provisional | ||
| pfam11721 | Malectin | 3.0e-6 | 1 | 134 | 151 | + Di-glucose binding within endoplasmic reticulum. Malectin is a membrane-anchored protein of the endoplasmic reticulum that recognises and binds Glc2-N-glycan. It carries a signal peptide from residues 1-26, a C-terminal transmembrane helix from residues 255-274, and a highly conserved central part of approximately 190 residues followed by an acidic, glutamate-rich region. Carbohydrate-binding is mediated by the four aromatic residues, Y67, Y89, Y116, and F117 and the aspartate at D186. NMR-based ligand-screening studies has shown binding of the protein to maltose and related oligosaccharides, on the basis of which the protein has been designated "malectin", and its endogenous ligand is found to be Glc2-high-mannose N-glycan. | ||
| pfam11721 | Malectin | 3.0e-16 | 172 | 331 | 174 | + Di-glucose binding within endoplasmic reticulum. Malectin is a membrane-anchored protein of the endoplasmic reticulum that recognises and binds Glc2-N-glycan. It carries a signal peptide from residues 1-26, a C-terminal transmembrane helix from residues 255-274, and a highly conserved central part of approximately 190 residues followed by an acidic, glutamate-rich region. Carbohydrate-binding is mediated by the four aromatic residues, Y67, Y89, Y116, and F117 and the aspartate at D186. NMR-based ligand-screening studies has shown binding of the protein to maltose and related oligosaccharides, on the basis of which the protein has been designated "malectin", and its endogenous ligand is found to be Glc2-high-mannose N-glycan. | ||
| pfam12819 | Malectin_like | 2.0e-61 | 5 | 334 | 351 | + Carbohydrate-binding protein of the ER. Malectin is a membrane-anchored protein of the endoplasmic reticulum that recognises and binds Glc2-N-glycan. The domain is found on a number of plant receptor kinases. | ||
| PLN03150 | PLN03150 | 9.0e-104 | 5 | 551 | 562 | + hypothetical protein; Provisional | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0005515 | protein binding |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAG50525.1 | 0 | 1 | 570 | 28 | 550 | AC084221_7 hypothetical protein [Arabidopsis thaliana] |
| RefSeq | NP_001145734.1 | 0 | 2 | 590 | 31 | 627 | hypothetical protein LOC100279241 [Zea mays] |
| RefSeq | NP_564237.2 | 0 | 1 | 590 | 28 | 620 | leucine-rich repeat protein-related [Arabidopsis thaliana] |
| RefSeq | XP_002281668.1 | 0 | 1 | 592 | 29 | 621 | PREDICTED: similar to leucine-rich repeat protein-related [Vitis vinifera] |
| RefSeq | XP_002524408.1 | 0 | 2 | 568 | 23 | 591 | serine-threonine protein kinase, plant-type, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 4hq1_A | 0.00000005 | 350 | 473 | 31 | 145 | A Chain A, Catalytic Domain Of Human Calpain 8 |
| PDB | 4hq1_A | 0.000007 | 409 | 479 | 221 | 295 | A Chain A, Catalytic Domain Of Human Calpain 8 |
| PDB | 3rj0_A | 0.000008 | 398 | 510 | 634 | 745 | A Chain A, Catalytic Domain Of Human Calpain 8 |
| PDB | 3rj0_A | 0.0007 | 384 | 483 | 386 | 483 | A Chain A, Catalytic Domain Of Human Calpain 8 |
