| Basic Information | |
|---|---|
| Species | Manihot esculenta |
| Cazyme ID | cassava4.1_031197m |
| Family | GH35 |
| Protein Properties | Length: 829 Molecular Weight: 93719.4 Isoelectric Point: 8.9982 |
| Chromosome | Chromosome/Scaffold: 11821 Start: 195246 End: 199920 |
| Description | glycosyl hydrolase family 35 protein |
| View CDS | |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GH35 | 38 | 342 | 0 |
| LIINGKRELLFSGSIHYPRSTPEMWPELITKAKHGGLNVIQTYVFWNIHEPVKGKYNFEGRFDLVKFIKEVQKQGLYVTLRLGPFIQAEWNHGGLPYWLR EVPDIIFRSYNEPFMIHMGKFIRMIMDKMKEEKLFAPQGGPIVLAQIENEYNTVQLAYRELGNKYVQWAGDFALSQGAGIPWVMCKQKDPPGPVINTCNG RHCGDTFSGPNQPNKPSLWTENWTAQFRVFGDPPSQRSAEDIAFSVARWFSKNGSLVNYYMYHGGTNLDRTAASFVTTRYYDEAPLDEYGLEREPKYGHM KNLHR | |||
| Full Sequence |
|---|
| Protein Sequence Length: 829 Download |
| MTVDIRGLFI MAIISLFISS AIVDGGETKE VSYDGRSLII NGKRELLFSG SIHYPRSTPE 60 MWPELITKAK HGGLNVIQTY VFWNIHEPVK GKYNFEGRFD LVKFIKEVQK QGLYVTLRLG 120 PFIQAEWNHG GLPYWLREVP DIIFRSYNEP FMIHMGKFIR MIMDKMKEEK LFAPQGGPIV 180 LAQIENEYNT VQLAYRELGN KYVQWAGDFA LSQGAGIPWV MCKQKDPPGP VINTCNGRHC 240 GDTFSGPNQP NKPSLWTENW TAQFRVFGDP PSQRSAEDIA FSVARWFSKN GSLVNYYMYH 300 GGTNLDRTAA SFVTTRYYDE APLDEYGLER EPKYGHMKNL HRALRLARKP LLWGAPGVEK 360 LGNDQEARFY KRPGTKLCAA FLTNNDTKNG YDVKFNGREF YLPPRSISIL PDCKTVVYNT 420 MTVVSQHNAR NFTKSKIANK KLKWETISEV IPTQLKTSSK IPLELYRLTK DATDYAWYTT 480 DVVLDPWDLS VRRDILPVLR VASLGHGMLA FVNGHFIGSA HGSQTEKSFV LQRPVELKRG 540 VNTITLLGSL VGLPDSGAYM EHRYAGPRGV RILGLNSGTL DLTSNGWGHE VGTTGERGQW 600 FTEEGSKKAT WKQVPKGEGP PISWYKASFD APEGNEPVAV RMTGMKKGMI WINGQSIGRY 660 WMSYVSPLAQ PTQSEYHIPR SYIKPKDNLI VVFEEEHANP EKIEFLLVNR DIICSYITEY 720 DPPHVRSWAR KDDRIKTVVD DVRPAAHLKC PNHKKFIKVE FASFGDPYGA CGGFVLGNCT 780 SPLSKQIVEE RCIGKAYCDI PIERDLFDKN NDACPDIKKT LAIQLLCG* 840 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam02449 | Glyco_hydro_42 | 2.0e-5 | 53 | 188 | 153 | + Beta-galactosidase. This group of beta-galactosidase enzymes belong to the glycosyl hydrolase 42 family. The enzyme catalyzes the hydrolysis of terminal, non-reducing terminal beta-D-galactosidase residues. | ||
| pfam02140 | Gal_Lectin | 3.0e-16 | 748 | 827 | 83 | + Galactose binding lectin domain. | ||
| COG1874 | LacA | 6.0e-20 | 31 | 188 | 168 | + Beta-galactosidase [Carbohydrate transport and metabolism] | ||
| pfam01301 | Glyco_hydro_35 | 2.0e-148 | 37 | 344 | 322 | + Glycosyl hydrolases family 35. | ||
| PLN03059 | PLN03059 | 0 | 8 | 827 | 846 | + beta-galactosidase; Provisional | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005529 | Interacting selectively and non-covalently with any carbohydrate, which includes monosaccharides, oligosaccharides and polysaccharides as well as substances derived from monosaccharides by reduction of the carbonyl group (alditols), by oxidation of one or more hydroxy groups to afford the corresponding aldehydes, ketones, or carboxylic acids, or by replacement of one or more hydroxy group(s) by a hydrogen atom. Cyclitols are generally not regarded as carbohydrates." [CHEBI:16646, GOC:mah] |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAS76480.1 | 0 | 23 | 828 | 41 | 843 | beta-galactosidase [Gossypium hirsutum] |
| GenBank | ACC60982.1 | 0 | 25 | 828 | 22 | 827 | beta-galactosidase 2 precursor [Petunia x hybrida] |
| RefSeq | XP_002278545.1 | 0 | 9 | 828 | 8 | 830 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002306183.1 | 0 | 22 | 827 | 22 | 826 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002312963.1 | 0 | 25 | 827 | 25 | 825 | predicted protein [Populus trichocarpa] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3d3a_A | 2e-37 | 37 | 340 | 14 | 325 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
| PDB | 3d3a_A | 0.00008 | 606 | 704 | 493 | 580 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
| PDB | 3thd_D | 2e-37 | 30 | 340 | 10 | 330 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
| PDB | 3thd_D | 0.0004 | 526 | 723 | 433 | 630 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
| PDB | 3thd_C | 2e-37 | 30 | 340 | 10 | 330 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| lactose degradation III | BETAGALACTOSID-RXN | EC-3.2.1.23 | β-galactosidase |
