| Basic Information | |
|---|---|
| Species | Manihot esculenta |
| Cazyme ID | cassava4.1_031454m |
| Family | CBM57 |
| Protein Properties | Length: 279 Molecular Weight: 31237.2 Isoelectric Point: 6.8408 |
| Chromosome | Chromosome/Scaffold: 11134 Start: 88 End: 1415 |
| Description | Leucine-rich repeat transmembrane protein kinase |
| View CDS | |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| CBM57 | 44 | 222 | 1.1e-26 |
| INSGGASLTFEKNHYDGDTSQAKFYEGPEESREKRWAYTCSDSFLSVSTDNPGVYIKNKTCGVSEESLHETARYCPVSLTYYGFCLHKGDYNVKLHFAEI VYTDDEDYSSSEKRVFDVYVQGERKLKDFSIKDEAKDTNKALQREFMAHVDDNLLEIHFHWAGKGSVSKSGSSNGPLVA | |||
| Full Sequence |
|---|
| Protein Sequence Length: 279 Download |
| FLLISCNLFC KPCCCSSSKP NRNYTLDART KFCQGKSKYY YLFINSGGAS LTFEKNHYDG 60 DTSQAKFYEG PEESREKRWA YTCSDSFLSV STDNPGVYIK NKTCGVSEES LHETARYCPV 120 SLTYYGFCLH KGDYNVKLHF AEIVYTDDED YSSSEKRVFD VYVQGERKLK DFSIKDEAKD 180 TNKALQREFM AHVDDNLLEI HFHWAGKGSV SKSGSSNGPL VAGISVTPNF TIPGGDKLST 240 PQIVGISVGS VFAPILLLAF MWKMGWLGNR ELQGETIF* |
| Functional Domains Download unfiltered results here | ||||||
|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description |
| pfam12819 | Malectin_like | 0.002 | 133 | 175 | 43 | + Carbohydrate-binding protein of the ER. Malectin is a membrane-anchored protein of the endoplasmic reticulum that recognises and binds Glc2-N-glycan. The domain is found on a number of plant receptor kinases. |
| PLN03150 | PLN03150 | 0.0006 | 133 | 203 | 71 | + hypothetical protein; Provisional |
| pfam11721 | Malectin | 2.0e-33 | 40 | 205 | 168 | + Di-glucose binding within endoplasmic reticulum. Malectin is a membrane-anchored protein of the endoplasmic reticulum that recognises and binds Glc2-N-glycan. It carries a signal peptide from residues 1-26, a C-terminal transmembrane helix from residues 255-274, and a highly conserved central part of approximately 190 residues followed by an acidic, glutamate-rich region. Carbohydrate-binding is mediated by the four aromatic residues, Y67, Y89, Y116, and F117 and the aspartate at D186. NMR-based ligand-screening studies has shown binding of the protein to maltose and related oligosaccharides, on the basis of which the protein has been designated "malectin", and its endogenous ligand is found to be Glc2-high-mannose N-glycan. |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ABF70100.1 | 0 | 13 | 236 | 350 | 572 | protein kinase, putative [Musa balbisiana] |
| RefSeq | XP_002323152.1 | 0 | 62 | 277 | 7 | 225 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002323341.1 | 0 | 34 | 277 | 292 | 530 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002333814.1 | 0 | 42 | 272 | 22 | 257 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002338709.1 | 0 | 42 | 276 | 3 | 243 | predicted protein [Populus trichocarpa] |
