| Basic Information | |
|---|---|
| Species | Manihot esculenta |
| Cazyme ID | cassava4.1_031624m |
| Family | CE8 |
| Protein Properties | Length: 373 Molecular Weight: 40470.5 Isoelectric Point: 7.3363 |
| Chromosome | Chromosome/Scaffold: 09876 Start: 895724 End: 897158 |
| Description | Pectin lyase-like superfamily protein |
| View CDS | |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| CE8 | 72 | 361 | 0 |
| IKVRADGSGEFKTITDAVDSIPTGNKQRVIVDIGPGTYNEKVIIEEDKPFITFLGPESGERPTLAFGSTAAEFVTAYTATLQVLSNFFVGANLIIQNTAP RPKGAKTNTQAAVACMIRGTMGAFYNVKMIGFRNTLCDYKGVHFFKDCFIEGTLEFIFGIGKSIYLQTEINVLADVPKELAIITGPAGQTKEQDVGFSIV HCKVGGKGSGAYLGRARSLMPRVVYSYCSMSDVISPEGWTNFDSPAFEETVFFGEYKNTGPGANTAKRAKFAKQLTEEEAKPFLNLGYIN | |||
| Full Sequence |
|---|
| Protein Sequence Length: 373 Download |
| MVKHLDFLSF AQYIFFAIIL AAIPARSDDK TPIPDAPDGV QKWFDANVKP LADRAGTLEK 60 ALEAAEAKPK TIKVRADGSG EFKTITDAVD SIPTGNKQRV IVDIGPGTYN EKVIIEEDKP 120 FITFLGPESG ERPTLAFGST AAEFVTAYTA TLQVLSNFFV GANLIIQNTA PRPKGAKTNT 180 QAAVACMIRG TMGAFYNVKM IGFRNTLCDY KGVHFFKDCF IEGTLEFIFG IGKSIYLQTE 240 INVLADVPKE LAIITGPAGQ TKEQDVGFSI VHCKVGGKGS GAYLGRARSL MPRVVYSYCS 300 MSDVISPEGW TNFDSPAFEE TVFFGEYKNT GPGANTAKRA KFAKQLTEEE AKPFLNLGYI 360 NGTIWLLPPP KP* 420 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02671 | PLN02671 | 3.0e-69 | 70 | 366 | 305 | + pectinesterase | ||
| PLN02480 | PLN02480 | 2.0e-69 | 70 | 366 | 298 | + Probable pectinesterase | ||
| PLN02304 | PLN02304 | 2.0e-72 | 71 | 368 | 304 | + probable pectinesterase | ||
| PLN02682 | PLN02682 | 5.0e-82 | 71 | 368 | 307 | + pectinesterase family protein | ||
| PLN02665 | PLN02665 | 2.0e-176 | 27 | 371 | 345 | + pectinesterase family protein | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0005618 | cell wall |
| GO:0030599 | pectinesterase activity |
| GO:0042545 | cell wall modification |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| RefSeq | XP_002309337.1 | 0 | 12 | 370 | 12 | 367 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002318197.1 | 0 | 12 | 370 | 8 | 363 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002511042.1 | 0 | 27 | 370 | 27 | 364 | Pectinesterase-1 precursor, putative [Ricinus communis] |
| RefSeq | XP_002511043.1 | 0 | 1 | 370 | 1 | 364 | Pectinesterase-1 precursor, putative [Ricinus communis] |
| RefSeq | XP_002511045.1 | 0 | 1 | 370 | 1 | 365 | Pectinesterase-1 precursor, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1gq8_A | 8e-35 | 63 | 366 | 1 | 308 | A Chain A, Pectin Methylesterase From Carrot |
| PDB | 1xg2_A | 9e-28 | 74 | 366 | 7 | 304 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
| PDB | 2ntq_B | 0.000000000004 | 73 | 354 | 10 | 328 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
| PDB | 2ntq_A | 0.000000000004 | 73 | 354 | 10 | 328 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
| PDB | 2ntp_B | 0.000000000004 | 73 | 354 | 10 | 328 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| homogalacturonan degradation | RXN-2102 | EC-3.1.1.11 | pectinesterase |
