| Basic Information | |
|---|---|
| Species | Manihot esculenta |
| Cazyme ID | cassava4.1_031687m |
| Family | CBM43 |
| Protein Properties | Length: 252 Molecular Weight: 26604.3 Isoelectric Point: 4.1068 |
| Chromosome | Chromosome/Scaffold: 06335 Start: 43252 End: 44081 |
| Description | Carbohydrate-binding X8 domain superfamily protein |
| View CDS | |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| CBM43 | 165 | 246 | 5.8e-33 |
| WCVAKPSVPDPIIQEAMNYACGSGADCESIQPSRSCFEPNTLFAHASYAFNSYWQRTKLAGGTCSFGGTAILVTVDPSYDGC | |||
| Full Sequence |
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| Protein Sequence Length: 252 Download |
| MDPSNPNPYV SSPFSLPPYD SLPPNPLPEN APPFCIYPPN TPLPPSTTIP TPSGSTPNLP 60 PQSPFPYLPP ILPILSPPPG PIGIVPSPPE TTPLPNPPEI VLSPPWSIPS PYYEPSPPSY 120 VPSPPTFVPS PTGYVPSPPI FLPPVVYPPP TGPPPPRTGP SQALWCVAKP SVPDPIIQEA 180 MNYACGSGAD CESIQPSRSC FEPNTLFAHA SYAFNSYWQR TKLAGGTCSF GGTAILVTVD 240 PSYDGCHFVY S* 300 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam07983 | X8 | 8.0e-21 | 164 | 235 | 77 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
| smart00768 | X8 | 2.0e-37 | 164 | 248 | 85 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. | ||
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CAN78496.1 | 0 | 1 | 251 | 62 | 262 | hypothetical protein [Vitis vinifera] |
| EMBL | CBI34142.1 | 0 | 1 | 251 | 53 | 253 | unnamed protein product [Vitis vinifera] |
| RefSeq | XP_002264966.1 | 0 | 4 | 250 | 66 | 367 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002312230.1 | 0 | 1 | 242 | 1 | 292 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002516415.1 | 0 | 1 | 251 | 1 | 263 | conserved hypothetical protein [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 2jon_A | 3e-20 | 165 | 248 | 13 | 96 | A Chain A, Solution Structure Of The C-Terminal Domain Ole E 9 |
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
| Hit | Length | Start | End | EValue |
| GR029881 | 90 | 161 | 250 | 0 |
| GR029880 | 90 | 161 | 250 | 0 |
| CF604722 | 94 | 157 | 250 | 0 |
| CK297659 | 89 | 163 | 251 | 0 |
| CF373123 | 96 | 157 | 252 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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