| Basic Information | |
|---|---|
| Species | Manihot esculenta |
| Cazyme ID | cassava4.1_031834m |
| Family | AA3 |
| Protein Properties | Length: 532 Molecular Weight: 58451.7 Isoelectric Point: 8.6995 |
| Chromosome | Chromosome/Scaffold: 09974 Start: 126779 End: 128485 |
| Description | Glucose-methanol-choline (GMC) oxidoreductase family protein |
| View CDS | |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| AA3 | 28 | 523 | 0 |
| SEDYYDYIVVGGGTAGCPLATSLSESHRVLLLERGGVAHGNSNLMTQEGFLTALTEVDTFDSPAQAFTSEDGVPNARGRILGGSSAINAGFYSRANPDFF RKSGLNWDLRLVNQSYDWVEKAVVFRPDLRNWQSAIRDGLLEAGINPYNGYSLDHLLGTKIGGSTFDVTGKRHSAADLLNYANPANIKVVAYASVERVLL ASTSYSKSKITAIGVVFRDHKGQYHHAMLHEKGEVILSAGAIGSPQLLLLSGIGPRPYLSSWGIPVAYHLPNVGRYLYDNPRNGISFVPSIPLEHSLIQV VGITDLGTYLEAASTVIPFTSPARSVFIRQTSAPLYLTVATLMEKIVGPLSIGSLRLASTDVRVNPIVRFNYFSHPLDVERCVNGTRKIGDVLRSRSMED FMFREWFGARRFRFVGPALPADQNDFVEMADFCRRTVSTIWHYHGGCVVGKVVDGDYHVYGVGALRVVDGSVFSVSPGTNPQATVMMMGRYVGLKM | |||
| Full Sequence |
|---|
| Protein Sequence Length: 532 Download |
| MRVTFLALNL YTEPSYLKFV INATEFPSED YYDYIVVGGG TAGCPLATSL SESHRVLLLE 60 RGGVAHGNSN LMTQEGFLTA LTEVDTFDSP AQAFTSEDGV PNARGRILGG SSAINAGFYS 120 RANPDFFRKS GLNWDLRLVN QSYDWVEKAV VFRPDLRNWQ SAIRDGLLEA GINPYNGYSL 180 DHLLGTKIGG STFDVTGKRH SAADLLNYAN PANIKVVAYA SVERVLLAST SYSKSKITAI 240 GVVFRDHKGQ YHHAMLHEKG EVILSAGAIG SPQLLLLSGI GPRPYLSSWG IPVAYHLPNV 300 GRYLYDNPRN GISFVPSIPL EHSLIQVVGI TDLGTYLEAA STVIPFTSPA RSVFIRQTSA 360 PLYLTVATLM EKIVGPLSIG SLRLASTDVR VNPIVRFNYF SHPLDVERCV NGTRKIGDVL 420 RSRSMEDFMF REWFGARRFR FVGPALPADQ NDFVEMADFC RRTVSTIWHY HGGCVVGKVV 480 DGDYHVYGVG ALRVVDGSVF SVSPGTNPQA TVMMMGRYVG LKMLRDRMTY K* 540 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PRK02106 | PRK02106 | 1.0e-10 | 374 | 516 | 155 | + choline dehydrogenase; Validated | ||
| TIGR03970 | Rv0697 | 5.0e-34 | 33 | 516 | 536 | + dehydrogenase, Rv0697 family. This model describes a set of dehydrogenases belonging to the glucose-methanol-choline oxidoreductase (GMC oxidoreductase) family. Members of the present family are restricted to Actinobacterial genome contexts containing also members of families TIGR03962 and TIGR03969 (the mycofactocin system), and are proposed to be uniform in function. | ||
| PRK02106 | PRK02106 | 8.0e-36 | 32 | 306 | 322 | + choline dehydrogenase; Validated | ||
| COG2303 | BetA | 6.0e-42 | 32 | 528 | 559 | + Choline dehydrogenase and related flavoproteins [Amino acid transport and metabolism] | ||
| PLN02785 | PLN02785 | 0 | 11 | 528 | 564 | + Protein HOTHEAD | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0016614 | oxidoreductase activity, acting on CH-OH group of donors |
| GO:0050660 | flavin adenine dinucleotide binding |
| GO:0055114 | oxidation-reduction process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ABE65766.1 | 0 | 14 | 528 | 36 | 551 | mandelonitrile lyase [Arabidopsis thaliana] |
| GenBank | ACN31582.1 | 0 | 15 | 531 | 36 | 586 | unknown [Zea mays] |
| RefSeq | NP_177448.1 | 0 | 14 | 528 | 36 | 551 | (R)-mandelonitrile lyase, putative / (R)-oxynitrilase, putative [Arabidopsis thaliana] |
| RefSeq | XP_002277531.1 | 0 | 14 | 528 | 32 | 547 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002311915.1 | 0 | 13 | 527 | 1 | 517 | predicted protein [Populus trichocarpa] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3gdp_B | 0 | 15 | 527 | 10 | 517 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |
| PDB | 3gdp_A | 0 | 15 | 527 | 10 | 517 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |
| PDB | 3gdn_B | 0 | 15 | 527 | 10 | 517 | A Chain A, Almond Hydroxynitrile Lyase In Complex With Benzaldehyde |
| PDB | 3gdn_A | 0 | 15 | 527 | 10 | 517 | A Chain A, Almond Hydroxynitrile Lyase In Complex With Benzaldehyde |
| PDB | 1ju2_B | 0 | 15 | 527 | 10 | 517 | A Chain A, Crystal Structure Of The Hydroxynitrile Lyase From Almond |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| amygdalin and prunasin degradation | MANDELONITRILE-LYASE-RXN | EC-4.1.2.10 | (R)-mandelonitrile lyase |
| vicianin bioactivation | MANDELONITRILE-LYASE-RXN | EC-4.1.2.10 | (R)-mandelonitrile lyase |
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
| Hit | Length | Start | End | EValue |
| HO796743 | 531 | 33 | 527 | 0 |
| GO514057 | 223 | 249 | 471 | 0 |
| EX668479 | 219 | 13 | 231 | 0 |
| DY277301 | 285 | 13 | 291 | 0 |
| FD579520 | 250 | 251 | 500 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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