y
Basic Information | |
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Species | Manihot esculenta |
Cazyme ID | cassava4.1_032034m |
Family | CE8 |
Protein Properties | Length: 203 Molecular Weight: 21770.2 Isoelectric Point: 9.7818 |
Chromosome | Chromosome/Scaffold: 06140 Start: 97959 End: 98651 |
Description | Pectin lyase-like superfamily protein |
View CDS |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CE8 | 71 | 203 | 5.19994e-41 |
ITLSKDGRGEFKTLTDAIKSISADNKQRVIIKISPGVYTEKIQIERNKPFITLLGDPKAMPTLAFGGTAHQYGTLYSATIAVESEYFMAVNIIFKNTAPG PITKNPGAQAVALRVSGDKAAFYNCKMLGFQDT |
Full Sequence |
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Protein Sequence Length: 203 Download |
MAKGRCIAAA HCVLIAILVV ATTVSSDDTT PIPADDSKVS NWFKTMVKPL VSRKGTLDPA 60 LEAAEAKSRT ITLSKDGRGE FKTLTDAIKS ISADNKQRVI IKISPGVYTE KIQIERNKPF 120 ITLLGDPKAM PTLAFGGTAH QYGTLYSATI AVESEYFMAV NIIFKNTAPG PITKNPGAQA 180 VALRVSGDKA AFYNCKMLGF QDT 240 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02634 | PLN02634 | 7.0e-31 | 69 | 203 | 142 | + probable pectinesterase | ||
PLN02773 | PLN02773 | 6.0e-33 | 68 | 203 | 147 | + pectinesterase | ||
pfam01095 | Pectinesterase | 8.0e-39 | 71 | 203 | 135 | + Pectinesterase. | ||
PLN02682 | PLN02682 | 1.0e-43 | 50 | 203 | 166 | + pectinesterase family protein | ||
PLN02665 | PLN02665 | 3.0e-107 | 7 | 203 | 198 | + pectinesterase family protein |
Gene Ontology | |
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GO Term | Description |
GO:0005618 | cell wall |
GO:0030599 | pectinesterase activity |
GO:0042545 | cell wall modification |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
RefSeq | XP_002309337.1 | 0 | 11 | 203 | 12 | 204 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002318197.1 | 0 | 7 | 203 | 4 | 200 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002333446.1 | 0 | 4 | 203 | 2 | 201 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002336983.1 | 0 | 7 | 203 | 4 | 200 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002511043.1 | 0 | 1 | 203 | 1 | 203 | Pectinesterase-1 precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1gq8_A | 6e-19 | 71 | 203 | 9 | 137 | A Chain A, Pectin Methylesterase From Carrot |
PDB | 1xg2_A | 0.000000000007 | 73 | 203 | 7 | 133 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 2ntq_B | 0.00000003 | 74 | 203 | 12 | 155 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 2ntq_A | 0.00000003 | 74 | 203 | 12 | 155 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 2ntp_B | 0.00000003 | 74 | 203 | 12 | 155 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
Metabolic Pathways | |||
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Pathway Name | Reaction | EC | Protein Name |
homogalacturonan degradation | RXN-2102 | EC-3.1.1.11 | pectinesterase |