| Basic Information | |
|---|---|
| Species | Manihot esculenta |
| Cazyme ID | cassava4.1_032261m |
| Family | CE8 |
| Protein Properties | Length: 332 Molecular Weight: 37048.5 Isoelectric Point: 4.6948 |
| Chromosome | Chromosome/Scaffold: 07571 Start: 693553 End: 694896 |
| Description | Pectin lyase-like superfamily protein |
| View CDS | |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| CE8 | 36 | 330 | 0 |
| ITVDISGHGNFTSVQSAIDFVPEGNTQWIRIQISPGKYSEKVAIPVNKSCIFLDGAGRELTSIEWGDHEETHTSATFTSYPDNIVAKGIKFKNTYNLPDG LNKIDIMKEELIWKQAVAARILGDKCAFYECGFVGLQDTLWDEEGRHYFNSCYIEGSVDFIFGQGQSIYEGCEISVNIGRFAPGVTGYITAQRKQQPQDS NGFVFKNCNISGTGTVDLGRAWGPYSTVVFYNSTMSDVIAPEGWNAWNFVNHEANFTYVEEDNKGPGADTSKRVPWEKKLDPNELQKFLNMSYVD | |||
| Full Sequence |
|---|
| Protein Sequence Length: 332 Download |
| MKNLYLFFIG GMVLLLHCSS RGCKASDCQP NTISTITVDI SGHGNFTSVQ SAIDFVPEGN 60 TQWIRIQISP GKYSEKVAIP VNKSCIFLDG AGRELTSIEW GDHEETHTSA TFTSYPDNIV 120 AKGIKFKNTY NLPDGLNKID IMKEELIWKQ AVAARILGDK CAFYECGFVG LQDTLWDEEG 180 RHYFNSCYIE GSVDFIFGQG QSIYEGCEIS VNIGRFAPGV TGYITAQRKQ QPQDSNGFVF 240 KNCNISGTGT VDLGRAWGPY STVVFYNSTM SDVIAPEGWN AWNFVNHEAN FTYVEEDNKG 300 PGADTSKRVP WEKKLDPNEL QKFLNMSYVD ED 360 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02304 | PLN02304 | 2.0e-87 | 31 | 332 | 309 | + probable pectinesterase | ||
| PLN02480 | PLN02480 | 1.0e-88 | 31 | 330 | 301 | + Probable pectinesterase | ||
| PLN02682 | PLN02682 | 8.0e-89 | 35 | 330 | 307 | + pectinesterase family protein | ||
| PLN02176 | PLN02176 | 9.0e-111 | 35 | 332 | 299 | + putative pectinesterase | ||
| PLN02497 | PLN02497 | 2.0e-134 | 35 | 330 | 296 | + probable pectinesterase | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0005618 | cell wall |
| GO:0030599 | pectinesterase activity |
| GO:0042545 | cell wall modification |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| RefSeq | XP_002330032.1 | 0 | 6 | 332 | 5 | 316 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002515255.1 | 0 | 13 | 332 | 12 | 328 | Pectinesterase-2 precursor, putative [Ricinus communis] |
| RefSeq | XP_002515259.1 | 0 | 22 | 332 | 346 | 653 | pectinesterase, putative [Ricinus communis] |
| RefSeq | XP_002515259.1 | 0 | 25 | 330 | 24 | 330 | pectinesterase, putative [Ricinus communis] |
| RefSeq | XP_002529267.1 | 0 | 31 | 332 | 35 | 330 | Pectinesterase-2 precursor, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1gq8_A | 4e-37 | 24 | 312 | 1 | 282 | A Chain A, Pectin Methylesterase From Carrot |
| PDB | 1xg2_A | 8e-29 | 33 | 311 | 2 | 277 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
| PDB | 3uw0_A | 1e-20 | 46 | 330 | 44 | 360 | A Chain A, Pectin Methylesterase From Yersinia Enterocolitica |
| PDB | 2ntq_B | 2e-20 | 46 | 307 | 18 | 315 | A Chain A, Pectin Methylesterase From Yersinia Enterocolitica |
| PDB | 2ntq_A | 2e-20 | 46 | 307 | 18 | 315 | A Chain A, Pectin Methylesterase From Yersinia Enterocolitica |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| homogalacturonan degradation | RXN-2102 | EC-3.1.1.11 | pectinesterase |
