y
Basic Information | |
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Species | Manihot esculenta |
Cazyme ID | cassava4.1_032359m |
Family | CBM43 |
Protein Properties | Length: 118 Molecular Weight: 13099.9 Isoelectric Point: 4.7442 |
Chromosome | Chromosome/Scaffold: 01514 Start: 112405 End: 113392 |
Description | Carbohydrate-binding X8 domain superfamily protein |
View CDS |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CBM43 | 29 | 107 | 2.4e-31 |
WCIADEQTPEEELQIALDWACGKGGADCRMIQKNQPCYLPNTVKDHASYAFNNYYHKFKHLGATCYFNSAAMITDLDPS |
Full Sequence |
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Protein Sequence Length: 118 Download |
MSSISSIFLV TLIFAALAPS KSDGEFKEWC IADEQTPEEE LQIALDWACG KGGADCRMIQ 60 KNQPCYLPNT VKDHASYAFN NYYHKFKHLG ATCYFNSAAM ITDLDPSNFP FTSPFIL* 120 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam07983 | X8 | 2.0e-18 | 29 | 100 | 77 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
smart00768 | X8 | 9.0e-34 | 29 | 108 | 80 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ABK92842.1 | 0 | 7 | 108 | 9 | 110 | unknown [Populus trichocarpa] |
RefSeq | XP_002307902.1 | 0 | 7 | 108 | 8 | 109 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002321180.1 | 0 | 9 | 108 | 9 | 108 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002522909.1 | 0 | 1 | 108 | 1 | 108 | hydrolase, hydrolyzing O-glycosyl compounds, putative [Ricinus communis] |
RefSeq | XP_002531703.1 | 0 | 1 | 108 | 1 | 108 | hydrolase, hydrolyzing O-glycosyl compounds, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2jon_A | 0.000000000008 | 19 | 113 | 3 | 100 | A Chain A, Solution Structure Of The C-Terminal Domain Ole E 9 |