| Basic Information | |
|---|---|
| Species | Manihot esculenta |
| Cazyme ID | cassava4.1_032401m |
| Family | GH14 |
| Protein Properties | Length: 273 Molecular Weight: 30862.7 Isoelectric Point: 9.1156 |
| Chromosome | Chromosome/Scaffold: 07069 Start: 52361 End: 53710 |
| Description | chloroplast beta-amylase |
| View CDS | |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GH14 | 87 | 246 | 0 |
| FVMLPLDTMTLGGNLNKPRAMNASLMALKSAGVEGVMVDAWWGLVEKDAPLKYKWEGYAELVQMVQKHGLKLQVVMSFHQCGGNVGDSCSIPLPPWVLEE ISKNPDLVYTDRSGRRNPEYISLGCDSIPVLRGRTPIQVYTDYMRSFQNRFKDYLGETIV | |||
| Full Sequence |
|---|
| Protein Sequence Length: 273 Download |
| MTLTLHSSTS FINLNDTKSI KTPDDFSGTV CFTQIKLSCR LRAKHAIQEV QLSHDNNFMM 60 KSRSDKWEKL HAISGPHSSN VAKVPVFVML PLDTMTLGGN LNKPRAMNAS LMALKSAGVE 120 GVMVDAWWGL VEKDAPLKYK WEGYAELVQM VQKHGLKLQV VMSFHQCGGN VGDSCSIPLP 180 PWVLEEISKN PDLVYTDRSG RRNPEYISLG CDSIPVLRGR TPIQVYTDYM RSFQNRFKDY 240 LGETIVYKLL YIYRNYCKEI IVPAALFQPQ RH* 300 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02905 | PLN02905 | 2.0e-59 | 79 | 272 | 194 | + beta-amylase | ||
| PLN02801 | PLN02801 | 4.0e-63 | 84 | 241 | 158 | + beta-amylase | ||
| pfam01373 | Glyco_hydro_14 | 3.0e-65 | 87 | 242 | 156 | + Glycosyl hydrolase family 14. This family are beta amylases. | ||
| PLN00197 | PLN00197 | 1.0e-90 | 84 | 246 | 163 | + beta-amylase; Provisional | ||
| PLN02803 | PLN02803 | 1.0e-173 | 1 | 246 | 248 | + beta-amylase | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0000272 | polysaccharide catabolic process |
| GO:0016161 | beta-amylase activity |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ACY25894.1 | 0 | 1 | 264 | 1 | 263 | beta-amylase 1 [Euphorbia esula] |
| GenBank | ACY25895.1 | 0 | 1 | 253 | 1 | 254 | beta-amylase 2 [Euphorbia esula] |
| RefSeq | XP_002326690.1 | 0 | 1 | 264 | 1 | 263 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002329547.1 | 0 | 1 | 264 | 1 | 264 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002517513.1 | 0 | 1 | 264 | 1 | 263 | Beta-amylase, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1b1y_A | 0 | 84 | 246 | 6 | 168 | A Chain A, Sevenfold Mutant Of Barley Beta-Amylase |
| PDB | 1ukp_D | 0 | 84 | 246 | 12 | 174 | A Chain A, Crystal Structure Of Soybean Beta-Amylase Mutant Substituted At Surface Region |
| PDB | 1ukp_C | 0 | 84 | 246 | 12 | 174 | A Chain A, Crystal Structure Of Soybean Beta-Amylase Mutant Substituted At Surface Region |
| PDB | 1ukp_B | 0 | 84 | 246 | 12 | 174 | A Chain A, Crystal Structure Of Soybean Beta-Amylase Mutant Substituted At Surface Region |
| PDB | 1ukp_A | 0 | 84 | 246 | 12 | 174 | A Chain A, Crystal Structure Of Soybean Beta-Amylase Mutant Substituted At Surface Region |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| starch degradation I | RXN-1827 | EC-3.2.1.2 | β-amylase |
| Hydropathy |
|---|
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
| Hit | Length | Start | End | EValue |
| CK268422 | 264 | 1 | 264 | 0 |
| CK265938 | 251 | 1 | 251 | 0 |
| EB428641 | 246 | 1 | 246 | 0 |
| DV138049 | 254 | 1 | 253 | 0 |
| CK288441 | 250 | 1 | 246 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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