| Basic Information | |
|---|---|
| Species | Manihot esculenta |
| Cazyme ID | cassava4.1_032503m |
| Family | CE8 |
| Protein Properties | Length: 401 Molecular Weight: 44879.4 Isoelectric Point: 7.176 |
| Chromosome | Chromosome/Scaffold: 02436 Start: 62720 End: 65760 |
| Description | Pectin lyase-like superfamily protein |
| View CDS | |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| CE8 | 92 | 369 | 0 |
| NVQKAVDVAPDFSPFPTLIIIDSGTYREKVTVHNSKTNLIFQGQSYQNTAIEWNDTANSTGGTVYSASVAIFALNFRAYNISFKNTAPSPSPGEVGGQAV ALRIAGDQAAFYGCGFYGAQDTLHDDRGRHYFRECFIQGSIDFIFGNARSLFEGCIINSIAKPPVAGVSGSVTAQARQSMSEQTGFSFVKCIVVGSGKVW LGRAWGAYATVVFSKSYMSNVVSPDGWNDWRDPSRDQTVFFGEYECYGDGANYAYRVSYGKQLTEYEASPYMNISYID | |||
| Full Sequence |
|---|
| Protein Sequence Length: 401 Download |
| MRIRTFSFWL FAFAIALISI IISISAILPS SLTTAPIKVP DSFQLLILRR VFKETGLEDT 60 ISRILSRHHH HHHHHHHHHH RKKPKCDRNS WNVQKAVDVA PDFSPFPTLI IIDSGTYREK 120 VTVHNSKTNL IFQGQSYQNT AIEWNDTANS TGGTVYSASV AIFALNFRAY NISFKNTAPS 180 PSPGEVGGQA VALRIAGDQA AFYGCGFYGA QDTLHDDRGR HYFRECFIQG SIDFIFGNAR 240 SLFEGCIINS IAKPPVAGVS GSVTAQARQS MSEQTGFSFV KCIVVGSGKV WLGRAWGAYA 300 TVVFSKSYMS NVVSPDGWND WRDPSRDQTV FFGEYECYGD GANYAYRVSY GKQLTEYEAS 360 PYMNISYIDG DQWLHLQNPI SIFSHEDDYD DGLPEFIHTF * 420 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02671 | PLN02671 | 2.0e-94 | 87 | 376 | 302 | + pectinesterase | ||
| PLN02634 | PLN02634 | 5.0e-97 | 92 | 374 | 290 | + probable pectinesterase | ||
| PLN02665 | PLN02665 | 2.0e-102 | 108 | 374 | 268 | + pectinesterase family protein | ||
| PLN02682 | PLN02682 | 2.0e-125 | 93 | 376 | 290 | + pectinesterase family protein | ||
| PLN02304 | PLN02304 | 4.0e-142 | 93 | 374 | 285 | + probable pectinesterase | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0005618 | cell wall |
| GO:0030599 | pectinesterase activity |
| GO:0042545 | cell wall modification |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CBI30191.1 | 0 | 33 | 374 | 31 | 399 | unnamed protein product [Vitis vinifera] |
| RefSeq | NP_181209.1 | 0 | 92 | 391 | 103 | 402 | pectinesterase family protein [Arabidopsis thaliana] |
| RefSeq | XP_002264941.1 | 0 | 92 | 374 | 27 | 309 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002326223.1 | 0 | 92 | 387 | 31 | 326 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002519425.1 | 0 | 30 | 400 | 30 | 394 | Pectinesterase PPE8B precursor, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1gq8_A | 3.9937e-43 | 93 | 375 | 22 | 309 | A Chain A, Pectin Methylesterase From Carrot |
| PDB | 1xg2_A | 3e-37 | 93 | 375 | 18 | 305 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
| PDB | 2ntq_B | 1e-17 | 93 | 362 | 21 | 328 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
| PDB | 2ntq_A | 1e-17 | 93 | 362 | 21 | 328 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
| PDB | 2ntp_B | 1e-17 | 93 | 362 | 21 | 328 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| homogalacturonan degradation | RXN-2102 | EC-3.1.1.11 | pectinesterase |
