| Basic Information | |
|---|---|
| Species | Manihot esculenta |
| Cazyme ID | cassava4.1_033247m |
| Family | CE8 |
| Protein Properties | Length: 291 Molecular Weight: 32726.9 Isoelectric Point: 8.0276 |
| Chromosome | Chromosome/Scaffold: 03049 Start: 956091 End: 957338 |
| Description | Pectin lyase-like superfamily protein |
| View CDS | |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| CE8 | 2 | 279 | 0 |
| HVDQLGQANFSRIQAAIDFIPSNNKQWFCIHVKAGIYREKVKIPSDKPYLILEGEGERTTFIVWGDHDSTLQSPTFMSSADNIVVRNISFVNKYNFLDNN KPLTPAVAAMISGDKSAFYQCDFAGVQDTLWDDQGRHYFKDCTILGAVDFIFGSGQSIYEGCSIKVLGGGYVTAQGRSNPNDANGFVFKMCNIFGTGPTY LGRPWRAYSRVIFYKCYFANVIDPRGWNPWNFLGQENRITYVEYENYGPGAASTQRVNWVKKLSPQAIDQFTSLSFIN | |||
| Full Sequence |
|---|
| Protein Sequence Length: 291 Download |
| IHVDQLGQAN FSRIQAAIDF IPSNNKQWFC IHVKAGIYRE KVKIPSDKPY LILEGEGERT 60 TFIVWGDHDS TLQSPTFMSS ADNIVVRNIS FVNKYNFLDN NKPLTPAVAA MISGDKSAFY 120 QCDFAGVQDT LWDDQGRHYF KDCTILGAVD FIFGSGQSIY EGCSIKVLGG GYVTAQGRSN 180 PNDANGFVFK MCNIFGTGPT YLGRPWRAYS RVIFYKCYFA NVIDPRGWNP WNFLGQENRI 240 TYVEYENYGP GAASTQRVNW VKKLSPQAID QFTSLSFINS GNWIQRQPSC * 300 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02682 | PLN02682 | 4.0e-82 | 7 | 285 | 291 | + pectinesterase family protein | ||
| PLN02480 | PLN02480 | 4.0e-82 | 1 | 284 | 291 | + Probable pectinesterase | ||
| PLN02432 | PLN02432 | 2.0e-91 | 1 | 285 | 287 | + putative pectinesterase | ||
| PLN02176 | PLN02176 | 7.0e-102 | 1 | 288 | 297 | + putative pectinesterase | ||
| PLN02497 | PLN02497 | 7.0e-171 | 1 | 288 | 297 | + probable pectinesterase | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0005618 | cell wall |
| GO:0030599 | pectinesterase activity |
| GO:0042545 | cell wall modification |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CBI40838.1 | 0 | 1 | 288 | 45 | 341 | unnamed protein product [Vitis vinifera] |
| RefSeq | NP_189055.1 | 0 | 1 | 288 | 34 | 332 | pectinesterase family protein [Arabidopsis thaliana] |
| RefSeq | XP_002263748.1 | 0 | 1 | 288 | 32 | 328 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002323773.1 | 0 | 3 | 288 | 3 | 288 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002518106.1 | 0 | 1 | 288 | 48 | 335 | Pectinesterase U1 precursor, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1gq8_A | 0 | 7 | 285 | 15 | 309 | A Chain A, Pectin Methylesterase From Carrot |
| PDB | 1xg2_A | 1.4013e-45 | 3 | 285 | 7 | 305 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
| PDB | 3uw0_A | 8e-18 | 11 | 273 | 44 | 353 | A Chain A, Pectin Methylesterase From Yersinia Enterocolitica |
| PDB | 1qjv_B | 8e-16 | 11 | 288 | 18 | 342 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
| PDB | 1qjv_A | 8e-16 | 11 | 288 | 18 | 342 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| homogalacturonan degradation | RXN-2102 | EC-3.1.1.11 | pectinesterase |
| Hydropathy |
|---|
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
| Hit | Length | Start | End | EValue |
| DV984237 | 289 | 10 | 286 | 0 |
| AW036464 | 209 | 61 | 260 | 0 |
| EE476551 | 219 | 1 | 209 | 0 |
| EX315894 | 274 | 25 | 286 | 0 |
| EX317112 | 272 | 27 | 286 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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